CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_1BL_B8B4C1FB6
(
Triticum aestivum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Traes_1BL_B8B4C1FB6
T021566_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.713
0.713
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_1BL_B8B4C1FB6.1
B3
184
294
FDKTVTPSDVGKLNRLVIPKQYAEKHFPLQLPSASAVVPGECKGMLLNFDDAVGKMWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSASGNNQLFIDCKIRS
Links
Other
B3
family TFs
Other
Triticum aestivum
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_20738
Aegilops tauschii
F775_20738
I
0.941
MLOC_38822
Hordeum vulgare
MLOC_38822
I
0.931
F775_22332
Aegilops tauschii
F775_22332
I
0.925
Traes_1BL_60A56C455
Triticum aestivum
Traes_1BL_60A56C455
I
0.891
Traes_1BL_F14523046
Triticum aestivum
Traes_1BL_F14523046
I
0.891
TRIUR3_10777
Triticum urartu
TRIUR3_10777
N
0.875
OB05G32250
Oryza brachyantha
OB05G32250
I
0.851
OLONG_000415
Oryza longistaminata
OLONG_000415
I
0.794
GRMZM2G018336
Zea mays
GRMZM2G018336
I
0.762
GRMZM2G065538
Zea mays
GRMZM2G065538
I
0.762
OB01G36520
Oryza brachyantha
OB01G36520
I
0.752
GSMUA_Achr1G03600_001
Musa acuminata
GSMUA_Achr1G03600_001
I
0.743
Si020241m.g
Setaria italica
Si020241m.g
N
0.743
mgf023686m
Mimulus guttatus
mgf023686m
I
0.743
MLOC_44012
Hordeum vulgare
MLOC_44012
I
0.733
TRIUR3_24850
Triticum urartu
TRIUR3_24850
I
0.733
Cla006845
Citrullus lanatus
Cla006845
I
0.733
Pavir.Ab02711
Panicum virgatum
Pavir.Ab02711
I
0.733
Eucgr.E01093
Eucalyptus grandis
Eucgr.E01093
I
0.723
Gorai.008G261100
Gossypium raimondii
Gorai.008G261100
I
0.723
GRMZM2G024948
Zea mays
GRMZM2G024948
N
0.713
MLOC_66387
Hordeum vulgare
MLOC_66387
I
0.713
OB02G35380
Oryza brachyantha
OB02G35380
I
0.713
PRUPE_ppa015999mg
Prunus persica
PRUPE_ppa015999mg
N
0.713
Sb04g031710
Sorghum bicolor
Sb04g031710
N
0.713
Solyc08g083400.2
Solanum lycopersicum
Solyc08g083400.2
I
0.713
Traes_3AS_2E5380A2A
Triticum aestivum
Traes_3AS_2E5380A2A
I
0.713
Traes_3AS_82DEC629B
Triticum aestivum
Traes_3AS_82DEC629B
N
0.713
Traes_4BL_D9784B20C1
Triticum aestivum
Traes_4BL_D9784B20C1
N
0.713
Traes_6AL_44AA5642C
Triticum aestivum
Traes_6AL_44AA5642C
I
0.713
Traes_6DL_359607E93
Triticum aestivum
Traes_6DL_359607E93
I
0.713
Ca_01368
Cicer arietinum
Ca_01368
I
0.713
Pm028725
Prunus mume
Pm028725
N
0.713
cassava39049.m1
Manihot esculenta
cassava39049.m1
I
0.713
Cucsa.349830
Cucumis sativus
Cucsa.349830
N
0.713
Cagra.11546s0001
Capsella grandiflora
Cagra.11546s0001
I
0.713
Carubv10010429m.g
Capsella rubella
Carubv10010429m.g
I
0.713
Lus10034276.g
Linum usitatissimum
Lus10034276.g
I
0.713
Pavir.Aa00929
Panicum virgatum
Pavir.Aa00929
N
0.713
AMTR_s00018p00040300
Amborella trichopoda
AMTR_s00018p00040300
N
0.703
BGIOSGA005835
Oryza indica
BGIOSGA005835
N
0.703
BGIOSGA014498
Oryza indica
BGIOSGA014498
I
0.703
BRADI5G19260
Brachypodium distachyon
BRADI5G19260
I
0.703
GRMZM2G018485
Zea mays
GRMZM2G018485
N
0.703
GRMZM2G082227
Zea mays
GRMZM2G082227
N
0.703
GSMUA_Achr4G26430_001
Musa acuminata
GSMUA_Achr4G26430_001
I
0.703
LPERR02G22870
Leersia perrieri
LPERR02G22870
I
0.703
LPERR04G18630
Leersia perrieri
LPERR04G18630
N
0.703
MTR_7g117455
Medicago truncatula
MTR_7g117455
I
0.703
MTR_8g023990
Medicago truncatula
MTR_8g023990
I
0.703
OBART02G28100
Oryza barthii
OBART02G28100
N
0.703
OBART04G22880
Oryza barthii
OBART04G22880
I
0.703
OGLUM02G28660
Oryza glumaepatula
OGLUM02G28660
N
0.703
OGLUM04G22780
Oryza glumaepatula
OGLUM04G22780
I
0.703
OMERI02G27240
Oryza meridionalis
OMERI02G27240
N
0.703
ONIVA04G22030
Oryza nivara
ONIVA04G22030
I
0.703
ONIVA12G15340
Oryza nivara
ONIVA12G15340
N
0.703
OPUNC02G25780
Oryza punctata
OPUNC02G25780
N
0.703
ORGLA02G0241100
Oryza glaberrima
ORGLA02G0241100
N
0.703
ORGLA04G0198400
Oryza glaberrima
ORGLA04G0198400
I
0.703
ORUFI02G29620
Oryza rufipogon
ORUFI02G29620
N
0.703
OS02G0683500
Oryza sativa
OS02G0683500
N
0.703
OS04G0581400
Oryza sativa
OS04G0581400
I
0.703
PGSC0003DMG400012222
Solanum tuberosum
PGSC0003DMG400012222
I
0.703
PRUPE_ppa019131mg
Prunus persica
PRUPE_ppa019131mg
I
0.703
TCM_005014
Theobroma cacao
TCM_005014
I
0.703
Traes_2BL_439C794F5
Triticum aestivum
Traes_2BL_439C794F5
N
0.703
TRIUR3_06598
Triticum urartu
TRIUR3_06598
N
0.703
Pm024248
Prunus mume
Pm024248
I
0.703
30068.m002615
Ricinus communis
30068.m002615
I
0.703
cassava36125.valid.m1
Manihot esculenta
cassava36125.valid.m1
I
0.703
Cucsa.193290
Cucumis sativus
Cucsa.193290
I
0.703
Eucgr.B03050
Eucalyptus grandis
Eucgr.B03050
I
0.703
Eucgr.L00348
Eucalyptus grandis
Eucgr.L00348
I
0.703
gene18594-v1.0-hybrid
Fragaria vesca
gene18594-v1.0-hybrid
I
0.703
Gorai.003G073600
Gossypium raimondii
Gorai.003G073600
I
0.703
Pavir.Ea00485
Panicum virgatum
Pavir.Ea00485
I
0.703