evm.TU.supercontig_798.1 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_798.1 T287182_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.870 0.925
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.870 0.925
MYB116
M07014_2.00 		Arabidopsis thaliana
NRCCTAAYTWNWNNN
NNNWNWARTTAGGYN		 Dap-seq
OMalley et al.(2016)
MYB116_col_a 		0.815 0.871
MYB116
M07015_2.00 		Arabidopsis thaliana
HNTRCCTAACTHH
DDAGTTAGGYAND		 Dap-seq
OMalley et al.(2016)
MYB116_colamp_a 		0.815 0.871
MYB108
M07065_2.00 		Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY		 Dap-seq
OMalley et al.(2016)
BOS1_col_a 		0.754 0.817
MYB05_ANTMA
M11067_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB305_Q3 		0.727 0.796
MYB57
M01072_2.00 		Arabidopsis thaliana
RCCTAAYT
ARTTAGGY		 PBM
Sullivan et al.(2014)
pTH9748 		0.713 0.742
MYB57
M07059_2.00 		Arabidopsis thaliana
YNTACCTAACTHHH
DDDAGTTAGGTANR		 Dap-seq
OMalley et al.(2016)
MYB57_col_a 		0.713 0.742
MYB57
M07060_2.00 		Arabidopsis thaliana
ACCTAAY
RTTAGGT		 Dap-seq
OMalley et al.(2016)
MYB57_colamp_a 		0.713 0.742
MYB24
M02311_2.00 		Arabidopsis thaliana
RCCDAMYNN
NNRKTHGGY		 PBM
Weirauch et al.(2014)
pTH8662 		0.711 0.785
ATMYB121
M07091_2.00 		Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN		 Dap-seq
OMalley et al.(2016)
MYB121_col_a 		0.707 0.731
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.692 0.667
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.662 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_798.1 Myb 33 80
evm.model.supercontig_798.1 Myb 86 131

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

680 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC002 Arabidopsis thaliana AT1G01720 D
NAC48 Oryza sativa OS01G0884300 D
BGIOSGA000374 Oryza indica BGIOSGA000374 I
BGIOSGA018048 Oryza indica BGIOSGA018048 I
BGIOSGA037382 Oryza indica BGIOSGA037382 I
Bo5g001100 Brassica oleracea Bo5g001100 I
Bra033239 Brassica rapa Bra033239 I
BRADI2G57100 Brachypodium distachyon BRADI2G57100 I
F775_28813 Aegilops tauschii F775_28813 I
F775_30297 Aegilops tauschii F775_30297 I
GLYMA05G32850 Glycine max GLYMA05G32850 I
GLYMA14G24220 Glycine max GLYMA14G24220 I
GRMZM2G014653 Zea mays GRMZM2G014653 I
GRMZM2G079632 Zea mays GRMZM2G079632 I
GRMZM2G083347 Zea mays GRMZM2G083347 I
GRMZM2G162739 Zea mays GRMZM2G162739 I
GSMUA_Achr4G02390_001 Musa acuminata GSMUA_Achr4G02390_001 I
GSMUA_Achr6G18720_001 Musa acuminata GSMUA_Achr6G18720_001 I
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I
LPERR01G34090 Leersia perrieri LPERR01G34090 I
LPERR05G13490 Leersia perrieri LPERR05G13490 I
LPERR07G06440 Leersia perrieri LPERR07G06440 I
LPERR12G01440 Leersia perrieri LPERR12G01440 I
MTR_1g008740 Medicago truncatula MTR_1g008740 I
MTR_8g094580 Medicago truncatula MTR_8g094580 I
OB01G48340 Oryza brachyantha OB01G48340 I
OBART01G39590 Oryza barthii OBART01G39590 I
OBART05G16540 Oryza barthii OBART05G16540 I
OGLUM01G43820 Oryza glumaepatula OGLUM01G43820 I
OGLUM05G17550 Oryza glumaepatula OGLUM05G17550 I
OGLUM12G13410 Oryza glumaepatula OGLUM12G13410 I
OMERI01G36460 Oryza meridionalis OMERI01G36460 I
OMERI05G14410 Oryza meridionalis OMERI05G14410 I
OMERI12G08420 Oryza meridionalis OMERI12G08420 I
ONIVA01G44460 Oryza nivara ONIVA01G44460 I
ONIVA05G17220 Oryza nivara ONIVA05G17220 I
ONIVA12G11920 Oryza nivara ONIVA12G11920 I
OPUNC01G38300 Oryza punctata OPUNC01G38300 I
OPUNC05G14600 Oryza punctata OPUNC05G14600 I
OPUNC12G10470 Oryza punctata OPUNC12G10470 I
ORGLA01G0334900 Oryza glaberrima ORGLA01G0334900 I
ORGLA05G0143100 Oryza glaberrima ORGLA05G0143100 I
ORUFI01G42940 Oryza rufipogon ORUFI01G42940 I
ORUFI05G17750 Oryza rufipogon ORUFI05G17750 I
ORUFI10G07040 Oryza rufipogon ORUFI10G07040 I
OS05G0415400 Oryza sativa OS05G0415400 I
OS12G0477400 Oryza sativa OS12G0477400 I
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I
POPTR_0004s04920 Populus trichocarpa POPTR_0004s04920 I
POPTR_0007s04780 Populus trichocarpa POPTR_0007s04780 I
Sb02g006680 Sorghum bicolor Sb02g006680 I
Sb03g041920 Sorghum bicolor Sb03g041920 I
Sb08g014060 Sorghum bicolor Sb08g014060 I
ATAF1 Arabidopsis lyrata scaffold_100066.1 I
SELMODRAFT_69090 Selaginella moellendorffii SELMODRAFT_69090 I
SELMODRAFT_71305 Selaginella moellendorffii SELMODRAFT_71305 I
Si002413m.g Setaria italica Si002413m.g I
Si004195m.g Setaria italica Si004195m.g I
Si022924m.g Setaria italica Si022924m.g I
Si030752m.g Setaria italica Si030752m.g I
Si036303m.g Setaria italica Si036303m.g I
Solyc04g009440.2 Solanum lycopersicum Solyc04g009440.2 I
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I
TCM_007543 Theobroma cacao TCM_007543 I
TCM_029796 Theobroma cacao TCM_029796 I
TCM_035160 Theobroma cacao TCM_035160 I
TRAES3BF002300010CFD_g Triticum aestivum TRAES3BF002300010CFD_g I
Traes_7DL_BDD45DB24 Triticum aestivum Traes_7DL_BDD45DB24 I
TRIUR3_14109 Triticum urartu TRIUR3_14109 I
TRIUR3_29250 Triticum urartu TRIUR3_29250 I
VIT_06s0004g00020 Vitis vinifera VIT_06s0004g00020 I
anac032 Vitis vinifera VIT_18s0001g02300 I
Ca_00111 Cicer arietinum Ca_00111 I
29992.m001406 Ricinus communis 29992.m001406 I
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I
cassava4505.m1 Manihot esculenta cassava4505.m1 I
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I
mgf004020m Mimulus guttatus mgf004020m I
mgf019285m Mimulus guttatus mgf019285m I
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I
Carubv10009926m.g Capsella rubella Carubv10009926m.g I
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I
Gorai.006G088400 Gossypium raimondii Gorai.006G088400 I
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I
Pavir.Ba03301 Panicum virgatum Pavir.Ba03301 I
Pavir.Bb00806 Panicum virgatum Pavir.Bb00806 I
Pavir.Ca02208 Panicum virgatum Pavir.Ca02208 I
Pavir.Cb00769 Panicum virgatum Pavir.Cb00769 I
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I
SapurV1A.0171s0340 Salix purpurea SapurV1A.0171s0340 I
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I
SapurV1A.0869s0210 Salix purpurea SapurV1A.0869s0210 I
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I
PK26157.1 Cannabis sativa PK26157.1 I
NAC089 Arabidopsis thaliana AT5G22290 N
NAC104 Arabidopsis thaliana AT5G64530 N
Bo2g166280 Brassica oleracea Bo2g166280 N
Bo3g101220 Brassica oleracea Bo3g101220 N
Bo9g018140 Brassica oleracea Bo9g018140 N
Bra024306 Brassica rapa Bra024306 N
Bra031915 Brassica rapa Bra031915 N
Bra037779 Brassica rapa Bra037779 N
ANAC104 Arabidopsis lyrata fgenesh2_kg.8__2481__AT5G64530.1 N
GLYMA05G24910 Glycine max GLYMA05G24910 N
GLYMA08G08010 Glycine max GLYMA08G08010 N
GLYMA15G05690 Glycine max GLYMA15G05690 N
MTR_4g094302 Medicago truncatula MTR_4g094302 N
PGSC0003DMG400029741 Solanum tuberosum PGSC0003DMG400029741 N
POPTR_0001s21440 Populus trichocarpa POPTR_0001s21440 N
POPTR_0003s01720 Populus trichocarpa POPTR_0003s01720 N
PRUPE_ppa019508mg Prunus persica PRUPE_ppa019508mg N
anac089 Arabidopsis lyrata scaffold_602275.1 N
Solyc01g104900.2 Solanum lycopersicum Solyc01g104900.2 N
Cla009592 Citrullus lanatus Cla009592 N
Pm004078 Prunus mume Pm004078 N
cassava1502.valid.m1 Manihot esculenta cassava1502.valid.m1 N
Bostr.0568s0345 Boechera stricta Bostr.0568s0345 N
Bostr.26527s0049 Boechera stricta Bostr.26527s0049 N
Cagra.0248s0135 Capsella grandiflora Cagra.0248s0135 N
Cagra.0846s0004 Capsella grandiflora Cagra.0846s0004 N
Carubv10001357m.g Capsella rubella Carubv10001357m.g N
Carubv10027198m.g Capsella rubella Carubv10027198m.g N
Ciclev10002538m.g Citrus clementina Ciclev10002538m.g N
Eucgr.I02695 Eucalyptus grandis Eucgr.I02695 N
evm.TU.supercontig_42.167 Carica papaya evm.TU.supercontig_42.167 N
Gorai.005G217400 Gossypium raimondii Gorai.005G217400 N
Gorai.008G014700 Gossypium raimondii Gorai.008G014700 N
Lus10000206.g Linum usitatissimum Lus10000206.g N
Lus10010747.g Linum usitatissimum Lus10010747.g N
Lus10035647.g Linum usitatissimum Lus10035647.g N
Lus10035648.g Linum usitatissimum Lus10035648.g N
MDP0000240094 Malus domestica MDP0000240094 N
orange1.1g029016m.g Citrus sinensis orange1.1g029016m.g N
Pavir.Bb01144 Panicum virgatum Pavir.Bb01144 N
Pavir.J05743 Panicum virgatum Pavir.J05743 N
Thhalv10004805m.g Eutrema salsugineum Thhalv10004805m.g N
chr4.CM0337.760.nc Lotus japonicus chr4.CM0337.760.nc N
chr6.CM0314.510.nd Lotus japonicus chr6.CM0314.510.nd N