CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NAC030
(
Arabidopsis thaliana
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
AT1G71930
T292044_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC030
M00974_2.00
Arabidopsis thaliana
NYACGBMWNN
NNWKVCGTRN
PBM
Lindemose et al.(2014)
VND7
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC105
M00980_2.00
Arabidopsis thaliana
NYWHKNHWNN
NNWDNMDWRN
PBM
Lindemose et al.(2014)
VND3
0.901
0.772
NAC105
M07245_2.00
Arabidopsis thaliana
NTTGCTTVNNNHNYAMG
CKTRNDNNNBAAGCAAN
Dap-seq
OMalley et al.(2016)
VND3_colamp_a
0.901
0.772
NAC105
M07246_2.00
Arabidopsis thaliana
TTGCTTVHNNHNYAMG
CKTRNDNNDBAAGCAA
Dap-seq
OMalley et al.(2016)
VND3_col
0.901
0.772
NAC037
M07187_2.00
Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG
Dap-seq
OMalley et al.(2016)
VND1_col_a
0.896
0.816
ANAC076
M07224_2.00
Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA
Dap-seq
OMalley et al.(2016)
VND2_col_a
0.877
0.789
ANAC076
M07225_2.00
Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND2_colamp_a
0.877
0.789
For this family, TFs with SR scores >
0.870
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00974_2.00
NAC/NAM
10
137
PPGFRFHPTEEELVGYYLDRKINSMKSALDVIVEIDLYKMEPWDIQARCKLGYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLSKNSVIGMRKTLVYYKGRAPNGRKSDWIMHEYRL
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G71930.1
NAC/NAM
10
137
PPGFRFHPTEEELVGYYLDRKINSMKSALDVIVEIDLYKMEPWDIQARCKLGYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLSKNSVIGMRKTLVYYKGRAPNGRKSDWIMHEYRL
AT1G71930.2
NAC/NAM
10
137
PPGFRFHPTEEELVGYYLDRKINSMKSALDVIVEIDLYKMEPWDIQARCKLGYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLSKNSVIGMRKTLVYYKGRAPNGRKSDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Arabidopsis thaliana
TFs
139 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NAC037
Arabidopsis thaliana
AT2G18060
D
0.896
ANAC076
Arabidopsis thaliana
AT4G36160
D
0.877
NAC105
Arabidopsis thaliana
AT5G66300
D
0.901
VND1
Arabidopsis lyrata
Al_scaffold_0003_3772
I
0.899
BGIOSGA011539
Oryza indica
BGIOSGA011539
I
0.877
BGIOSGA033343
Oryza indica
BGIOSGA033343
I
0.875
Bo1g005810
Brassica oleracea
Bo1g005810
I
0.882
Bo2g075130
Brassica oleracea
Bo2g075130
I
0.951
Bo3g093950
Brassica oleracea
Bo3g093950
I
0.892
Bo6g114440
Brassica oleracea
Bo6g114440
I
0.966
Bo7g011640
Brassica oleracea
Bo7g011640
I
0.897
Bo7g065010
Brassica oleracea
Bo7g065010
I
0.913
Bo7g117820
Brassica oleracea
Bo7g117820
I
0.888
Bra007996
Brassica rapa
Bra007996
I
0.951
Bra011667
Brassica rapa
Bra011667
I
0.882
Bra012065
Brassica rapa
Bra012065
I
0.913
Bra016098
Brassica rapa
Bra016098
I
0.969
Bra017750
Brassica rapa
Bra017750
I
0.888
F775_20020
Aegilops tauschii
F775_20020
I
0.876
VND7
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2001196
I
0.962
ANAC076
Arabidopsis lyrata
fgenesh2_kg.7__450__AT4G36160.1
I
0.888
ANAC105
Arabidopsis lyrata
fgenesh2_kg.8__2792__AT5G66300.1
I
0.914
GLYMA01G37310
Glycine max
GLYMA01G37310
I
0.923
GLYMA02G05620
Glycine max
GLYMA02G05620
I
0.899
GLYMA10G36050
Glycine max
GLYMA10G36050
I
0.941
GLYMA11G07990
Glycine max
GLYMA11G07990
I
0.923
GLYMA16G24200
Glycine max
GLYMA16G24200
I
0.902
GLYMA20G31551
Glycine max
GLYMA20G31551
I
0.951
GRMZM2G025642
Zea mays
GRMZM2G025642
I
0.871
GSMUA_Achr11G03040_001
Musa acuminata
GSMUA_Achr11G03040_001
I
0.892
GSMUA_Achr8G12100_001
Musa acuminata
GSMUA_Achr8G12100_001
I
0.892
LPERR03G01990
Leersia perrieri
LPERR03G01990
I
0.876
MLOC_56769
Hordeum vulgare
MLOC_56769
I
0.873
MTR_1g096430
Medicago truncatula
MTR_1g096430
I
0.949
MTR_5g021710
Medicago truncatula
MTR_5g021710
I
0.927
OB03G12100
Oryza brachyantha
OB03G12100
I
0.877
OB10G23740
Oryza brachyantha
OB10G23740
I
0.875
OBART03G02180
Oryza barthii
OBART03G02180
I
0.877
OGLUM03G02130
Oryza glumaepatula
OGLUM03G02130
I
0.877
OLONG_011521
Oryza longistaminata
OLONG_011521
I
0.877
OMERI03G02020
Oryza meridionalis
OMERI03G02020
I
0.877
ONIVA03G01790
Oryza nivara
ONIVA03G01790
I
0.877
OPUNC03G01920
Oryza punctata
OPUNC03G01920
I
0.877
ORGLA03G0019500
Oryza glaberrima
ORGLA03G0019500
I
0.877
ORUFI03G01920
Oryza rufipogon
ORUFI03G01920
I
0.877
OS10G0532000
Oryza sativa
OS10G0532000
I
0.875
PGSC0003DMG400000887
Solanum tuberosum
PGSC0003DMG400000887
I
0.948
PGSC0003DMG400026079
Solanum tuberosum
PGSC0003DMG400026079
I
0.934
PGSC0003DMG401003552
Solanum tuberosum
PGSC0003DMG401003552
I
0.896
POPTR_0005s11870
Populus trichocarpa
POPTR_0005s11870
I
0.898
POPTR_0007s13910
Populus trichocarpa
POPTR_0007s13910
I
0.910
POPTR_0013s11740
Populus trichocarpa
POPTR_0013s11740
I
0.939
POPTR_0019s11330
Populus trichocarpa
POPTR_0019s11330
I
0.923
PRUPE_ppa016236mg
Prunus persica
PRUPE_ppa016236mg
I
0.941
PRUPE_ppa022264mg
Prunus persica
PRUPE_ppa022264mg
I
0.881
Sb01g048730
Sorghum bicolor
Sb01g048730
I
0.880
SELMODRAFT_451784
Selaginella moellendorffii
SELMODRAFT_451784
I
0.873
SELMODRAFT_57388
Selaginella moellendorffii
SELMODRAFT_57388
I
0.873
Si036363m.g
Setaria italica
Si036363m.g
I
0.880
Solyc02g084350.2
Solanum lycopersicum
Solyc02g084350.2
I
0.896
Solyc06g065410.2
Solanum lycopersicum
Solyc06g065410.2
I
0.934
Solyc08g079120.1
Solanum lycopersicum
Solyc08g079120.1
I
0.871
Solyc11g018660.1
Solanum lycopersicum
Solyc11g018660.1
I
0.925
TCM_000235
Theobroma cacao
TCM_000235
I
0.898
TCM_036364
Theobroma cacao
TCM_036364
I
0.937
Traes_4BL_03B8EA3BF
Triticum aestivum
Traes_4BL_03B8EA3BF
I
0.876
Traes_4DL_54E14ABCB
Triticum aestivum
Traes_4DL_54E14ABCB
I
0.876
ANAC076
Vitis vinifera
VIT_04s0023g03110
I
0.898
VND7
Vitis vinifera
VIT_18s0072g01060
I
0.943
Ca_01981
Cicer arietinum
Ca_01981
I
0.923
Ca_04309
Cicer arietinum
Ca_04309
I
0.946
Cla014492
Citrullus lanatus
Cla014492
I
0.875
Cla016604
Citrullus lanatus
Cla016604
I
0.932
Pm022184
Prunus mume
Pm022184
I
0.943
Pm026735
Prunus mume
Pm026735
I
0.881
28623.m000400
Ricinus communis
28623.m000400
I
0.896
29728.m000815
Ricinus communis
29728.m000815
I
0.939
cassava24947.valid.m1
Manihot esculenta
cassava24947.valid.m1
I
0.898
cassava25360.m1
Manihot esculenta
cassava25360.m1
I
0.944
cassava26615.m1
Manihot esculenta
cassava26615.m1
I
0.897
cassava40790.m1
Manihot esculenta
cassava40790.m1
I
0.928
Cucsa.043420
Cucumis sativus
Cucsa.043420
I
0.890
Cucsa.240650
Cucumis sativus
Cucsa.240650
I
0.927
mgf009391m
Mimulus guttatus
mgf009391m
I
0.932
mgf022574m
Mimulus guttatus
mgf022574m
I
0.892
mgf026153m
Mimulus guttatus
mgf026153m
I
0.874
Aquca_006_00155
Aquilegia coerulea
Aquca_006_00155
I
0.895
Aquca_007_00369
Aquilegia coerulea
Aquca_007_00369
I
0.931
Bostr.0568s0042
Boechera stricta
Bostr.0568s0042
I
0.914
Bostr.10273s0160
Boechera stricta
Bostr.10273s0160
I
0.969
Bostr.18351s0273
Boechera stricta
Bostr.18351s0273
I
0.885
Bostr.7867s1483
Boechera stricta
Bostr.7867s1483
I
0.877
Cagra.10427s0040
Capsella grandiflora
Cagra.10427s0040
I
0.914
Cagra.4006s0034
Capsella grandiflora
Cagra.4006s0034
I
0.969
Cagra.4734s0006
Capsella grandiflora
Cagra.4734s0006
I
0.888
Carubv10004997m.g
Capsella rubella
Carubv10004997m.g
I
0.888
Carubv10020645m.g
Capsella rubella
Carubv10020645m.g
I
0.969
Carubv10026898m.g
Capsella rubella
Carubv10026898m.g
I
0.914
Ciclev10003255m.g
Citrus clementina
Ciclev10003255m.g
I
0.940
Ciclev10026114m.g
Citrus clementina
Ciclev10026114m.g
I
0.898
Eucgr.F02615
Eucalyptus grandis
Eucgr.F02615
I
0.949
Eucgr.I02366
Eucalyptus grandis
Eucgr.I02366
I
0.894
evm.TU.contig_30558
Carica papaya
evm.TU.contig_30558
I
0.940
evm.TU.supercontig_6.226
Carica papaya
evm.TU.supercontig_6.226
I
0.898
gene14869-v1.0-hybrid
Fragaria vesca
gene14869-v1.0-hybrid
I
0.879
Gorai.003G010700
Gossypium raimondii
Gorai.003G010700
I
0.894
Gorai.007G048000
Gossypium raimondii
Gorai.007G048000
I
0.880
Gorai.007G196400
Gossypium raimondii
Gorai.007G196400
I
0.895
Gorai.008G063600
Gossypium raimondii
Gorai.008G063600
I
0.898
Gorai.013G140700
Gossypium raimondii
Gorai.013G140700
I
0.920
Lus10017915.g
Linum usitatissimum
Lus10017915.g
I
0.932
Lus10028372.g
Linum usitatissimum
Lus10028372.g
I
0.888
Lus10041822.g
Linum usitatissimum
Lus10041822.g
I
0.888
MDP0000136180
Malus domestica
MDP0000136180
I
0.881
MDP0000176447
Malus domestica
MDP0000176447
I
0.881
MDP0000298965
Malus domestica
MDP0000298965
I
0.881
MDP0000299959
Malus domestica
MDP0000299959
I
0.881
MDP0000849944
Malus domestica
MDP0000849944
I
0.943
MDP0000902822
Malus domestica
MDP0000902822
I
0.938
orange1.1g019821m.g
Citrus sinensis
orange1.1g019821m.g
I
0.940
orange1.1g021187m.g
Citrus sinensis
orange1.1g021187m.g
I
0.898
Pavir.Ib00161
Panicum virgatum
Pavir.Ib00161
I
0.880
Pavir.J32898
Panicum virgatum
Pavir.J32898
I
0.876
SapurV1A.0166s0460
Salix purpurea
SapurV1A.0166s0460
I
0.881
SapurV1A.0179s0040
Salix purpurea
SapurV1A.0179s0040
I
0.942
SapurV1A.0287s0280
Salix purpurea
SapurV1A.0287s0280
I
0.920
SapurV1A.0287s0290
Salix purpurea
SapurV1A.0287s0290
I
0.920
SapurV1A.0487s0230
Salix purpurea
SapurV1A.0487s0230
I
0.898
SapurV1A.1801s0020
Salix purpurea
SapurV1A.1801s0020
I
0.920
SapurV1A.2633s0010
Salix purpurea
SapurV1A.2633s0010
I
0.920
SapurV1A.3982s0010
Salix purpurea
SapurV1A.3982s0010
I
0.881
Thhalv10018853m.g
Eutrema salsugineum
Thhalv10018853m.g
I
0.969
Thhalv10022756m.g
Eutrema salsugineum
Thhalv10022756m.g
I
0.899
Thhalv10025510m.g
Eutrema salsugineum
Thhalv10025510m.g
I
0.883
PK11173.1
Cannabis sativa
PK11173.1
I
0.899
LjSGA_075859.1
Lotus japonicus
LjSGA_075859.1
I
0.941
PDK_20s1306451g001
Phoenix dactylifera
PDK_20s1306451g001
I
0.895
PDK_20s1503311g001
Phoenix dactylifera
PDK_20s1503311g001
I
0.906