Cla020838 (Citrullus lanatus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cla020838 T296594_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.908 0.807
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.908 0.807
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla020838 NAC/NAM 31 157

Links

Other NAC/NAM family TFs
Other Citrullus lanatus TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC050 Arabidopsis thaliana AT3G10480 D 0.920
Bostr.22252s0011 Boechera stricta Bostr.22252s0011 I 0.908
Gorai.009G309300 Gossypium raimondii Gorai.009G309300 I 0.917
gene23561-v1.0-hybrid Fragaria vesca gene23561-v1.0-hybrid I 0.943
Eucgr.J01038 Eucalyptus grandis Eucgr.J01038 I 0.915
Ciclev10031606m.g Citrus clementina Ciclev10031606m.g I 0.906
Carubv10013694m.g Capsella rubella Carubv10013694m.g I 0.908
Carubv10013564m.g Capsella rubella Carubv10013564m.g I 0.904
Cagra.0834s0029 Capsella grandiflora Cagra.0834s0029 I 0.908
Cagra.0834s0028 Capsella grandiflora Cagra.0834s0028 I 0.904
Bostr.22252s0012 Boechera stricta Bostr.22252s0012 I 0.908
Gorai.012G007000 Gossypium raimondii Gorai.012G007000 I 0.922
mgf004743m Mimulus guttatus mgf004743m I 0.905
mgf000623m Mimulus guttatus mgf000623m I 0.881
Cucsa.308770 Cucumis sativus Cucsa.308770 I 0.891
Cucsa.308760 Cucumis sativus Cucsa.308760 I 0.970
cassava22912.valid.m1 Manihot esculenta cassava22912.valid.m1 I 0.923
28872.m000248 Ricinus communis 28872.m000248 I 0.881
Pm017550 Prunus mume Pm017550 I 0.892
Pm017547 Prunus mume Pm017547 I 0.924
orange1.1g014130m.g Citrus sinensis orange1.1g014130m.g I 0.906
chr5.CM0909.750.nc Lotus japonicus chr5.CM0909.750.nc I 0.964
PK11467.1 Cannabis sativa PK11467.1 I 0.881
PK06477.1 Cannabis sativa PK06477.1 I 0.961
Thhalv10020745m.g Eutrema salsugineum Thhalv10020745m.g I 0.904
Thhalv10020717m.g Eutrema salsugineum Thhalv10020717m.g I 0.904
SapurV1A.0213s0330 Salix purpurea SapurV1A.0213s0330 I 0.879
SapurV1A.0213s0310 Salix purpurea SapurV1A.0213s0310 I 0.923
Pavir.Fb02407 Panicum virgatum Pavir.Fb02407 I 0.881
Pavir.Fa00048 Panicum virgatum Pavir.Fa00048 I 0.881
Gorai.011G234200 Gossypium raimondii Gorai.011G234200 I 0.902
MDP0000695714 Malus domestica MDP0000695714 I 0.891
MDP0000457996 Malus domestica MDP0000457996 I 0.891
MDP0000437676 Malus domestica MDP0000437676 I 0.928
MDP0000258167 Malus domestica MDP0000258167 I 0.949
Lus10038670.g Linum usitatissimum Lus10038670.g I 0.921
Lus10037939.g Linum usitatissimum Lus10037939.g I 0.921
Lus10023537.g Linum usitatissimum Lus10023537.g I 0.912
Cla020837 Citrullus lanatus Cla020837 I 0.891
ANAC050 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000864 I 0.908
PGSC0003DMG402023373 Solanum tuberosum PGSC0003DMG402023373 I 0.909
PGSC0003DMG401023373 Solanum tuberosum PGSC0003DMG401023373 I 0.889
OB08G30590 Oryza brachyantha OB08G30590 I 0.887
MTR_1g090720 Medicago truncatula MTR_1g090720 I 0.962
LPERR08G20450 Leersia perrieri LPERR08G20450 I 0.887
GLYMA20G33430 Glycine max GLYMA20G33430 I 0.964
GLYMA10G34130 Glycine max GLYMA10G34130 I 0.964
ANAC052 Arabidopsis lyrata fgenesh2_kg.3__1083__AT3G10490.2 I 0.908
Ca_08371 Cicer arietinum Ca_08371 I 0.965
F775_27564 Aegilops tauschii F775_27564 I 0.880
Bra034119 Brassica rapa Bra034119 I 0.894
Bra034118 Brassica rapa Bra034118 I 0.879
Bra029844 Brassica rapa Bra029844 I 0.878
Bo5g137360 Brassica oleracea Bo5g137360 I 0.878
Bo1g143850 Brassica oleracea Bo1g143850 I 0.879
Bo1g143840 Brassica oleracea Bo1g143840 I 0.894
ANAC052 Arabidopsis thaliana AT3G10490 I 0.891
POPTR_0010s23630 Populus trichocarpa POPTR_0010s23630 I 0.924
AMTR_s00071p00055960 Amborella trichopoda AMTR_s00071p00055960 I 0.885
VIT_13s0019g05240 Vitis vinifera VIT_13s0019g05240 I 0.921
VIT_13s0019g05230 Vitis vinifera VIT_13s0019g05230 I 0.924
TRIUR3_33524 Triticum urartu TRIUR3_33524 I 0.880
Traes_7DS_9FBF54244 Triticum aestivum Traes_7DS_9FBF54244 I 0.880
Traes_7BL_FB5FAC1E8 Triticum aestivum Traes_7BL_FB5FAC1E8 I 0.880
TCM_043357 Theobroma cacao TCM_043357 I 0.925
Solyc11g008000.1 Solanum lycopersicum Solyc11g008000.1 I 0.876
Solyc05g055480.2 Solanum lycopersicum Solyc05g055480.2 I 0.901
Solyc05g055470.2 Solanum lycopersicum Solyc05g055470.2 I 0.913
Si013361m.g Setaria italica Si013361m.g I 0.881
Sb07g023900 Sorghum bicolor Sb07g023900 I 0.883
PRUPE_ppa003239mg Prunus persica PRUPE_ppa003239mg I 0.892
POPTR_0010s23650 Populus trichocarpa POPTR_0010s23650 I 0.879
POPTR_0008s03170 Populus trichocarpa POPTR_0008s03170 I 0.878
Eucgr.G02740 Eucalyptus grandis Eucgr.G02740 N 0.891
PGSC0003DMG400031071 Solanum tuberosum PGSC0003DMG400031071 N 0.871
PGSC0003DMG400031072 Solanum tuberosum PGSC0003DMG400031072 N 0.915
AMTR_s00140p00087970 Amborella trichopoda AMTR_s00140p00087970 N 0.900