PPA24481 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA24481 T305926_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.865 0.600
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.848 0.586
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.809 0.643
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.804 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA24481 Nuclear receptor 104 175

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VDBG_06317 Verticillium albo atrum VDBG_06317 N
CFIO01_07137 Colletotrichum fioriniae CFIO01_07137 N
CGGC5_7955 Colletotrichum gloeosporioides CGGC5_7955 N
CH063_10062 Colletotrichum higginsianum CH063_10062 N
Cob_11280 Colletotrichum orbiculare Cob_11280 N
CSUB01_11051 Colletotrichum sublineola CSUB01_11051 N
PV09_00498 Verruconis gallopava PV09_00498 N
VDAG_03469 Verticillium dahliae VDAG_03469 N
VDBG_06317 Verticillium alfalfae VDBG_06317 N