Sakowv30007027m.g (Saccoglossus kowalevskii)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 Sakowv30007027m.g T307037_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GA30480
M02409_2.00 		Drosophila pseudoobscura
RAGATCAM
KTGATCTY		 PBM
Weirauch et al.(2014)
pTH5877 		0.978 0.843
Hr51
M06432_2.00 		Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT		 B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012 		0.978 0.843
NR2E3
M00373_2.00 		Homo sapiens
NRAGATCAMN
NKTGATCTYN		 PBM
Barrera et al.(2016)
NR2E3_REF 		0.964 0.814
Nr2e3
M02708_2.00 		Mus musculus
AAGCTTD
HAAGCTT		 SELEX
Mathelier et al.(2014)
MA0164.1 		0.964 0.814
Nr2e3
M09328_2.00 		Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN		 Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C 		0.964 0.814
NR2E3
M00372_2.00 		Homo sapiens
AAAGATCA
TGATCTTT		 PBM
Barrera et al.(2016)
NR2E3_R77Q 		0.964 0.800
NR2E3
M00370_2.00 		Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN		 PBM
Barrera et al.(2016)
NR2E3_R76Q 		0.959 0.800
NR2E3
M00371_2.00 		Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN		 PBM
Barrera et al.(2016)
NR2E3_R76W 		0.952 0.800
NR2E3
M00369_2.00 		Homo sapiens
NGGGRTCAHN
NDTGAYCCCN		 PBM
Barrera et al.(2016)
NR2E3_G56R 		0.944 0.800
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23925857_peptide Nuclear receptor 74 144

Links

Other Nuclear receptor family TFs
Other Saccoglossus kowalevskii TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NR2E3 Homo sapiens ENSG00000278570 D 0.964
Nr2e3 Mus musculus ENSMUSG00000032292 D 0.964
Hr51 Drosophila melanogaster FBgn0034012 D 0.978
GA30480 Drosophila pseudoobscura FBgn0264774 D 0.978
WUBG_05086 Wuchereria bancrofti WUBG_05086 I 0.821
AAEL007190 Aedes aegypti AAEL007190 I 0.978
ACYPI007601 Acyrthosiphon pisum ACYPI007601 I 0.978
ADAC006988 Anopheles darlingi ADAC006988 I 0.978
Bm4485 Brugia malayi Bm4485 I 0.985
CapteG171557 Capitella teleta CapteG171557 I 0.979
CBG14155 Caenorhabditis briggsae CBG14155 I 0.985
CBN22518 Caenorhabditis brenneri CBN22518 I 0.985
CGI_10007932 Crassostrea gigas CGI_10007932 I 0.978
CJA07370 Caenorhabditis japonica CJA07370 I 0.985
CRE00427 Caenorhabditis remanei CRE00427 I 0.985
DAPPUDRAFT_106791 Daphnia pulex DAPPUDRAFT_106791 I 0.972
EFV56045 Trichinella spiralis EFV56045 I 0.976
NR2E3 Anolis carolinensis ENSACAG00000011910 I 0.978
ENSAMEG00000008835 Ailuropoda melanoleuca ENSAMEG00000008835 I 0.919
ENSAMXG00000017872 Astyanax mexicanus ENSAMXG00000017872 I 0.977
NR2E3 Bos taurus ENSBTAG00000014236 I 0.964
NR2E3 Callithrix jacchus ENSCJAG00000018552 I 0.964
NR2E3 Cavia porcellus ENSCPOG00000008974 I 0.964
ENSCSAG00000013721 Chlorocebus sabaeus ENSCSAG00000013721 I 0.964
nr2e3 Danio rerio ENSDARG00000045904 I 0.977
NR2E3 Equus caballus ENSECAG00000015192 I 0.964
ENSFALG00000009699 Ficedula albicollis ENSFALG00000009699 I 0.980
NR2E3 Felis catus ENSFCAG00000031082 I 0.964
nr2e3 Gasterosteus aculeatus ENSGACG00000004739 I 0.960
NR2E3 Gasterosteus aculeatus ENSGACG00000017060 I 0.978
NR2E3 Gallus gallus ENSGALG00000002093 I 0.980
NR2E3 Gorilla gorilla ENSGGOG00000004383 I 0.964
ENSGMOG00000008342 Gadus morhua ENSGMOG00000008342 I 0.957
ENSGMOG00000019194 Gadus morhua ENSGMOG00000019194 I 0.978
ENSLACG00000022378 Latimeria chalumnae ENSLACG00000022378 I 0.978
ENSLOCG00000014973 Lepisosteus oculatus ENSLOCG00000014973 I 0.978
ENSMEUG00000016597 Macropus eugenii ENSMEUG00000016597 I 0.970
NR2E3 Meleagris gallopavo ENSMGAG00000001449 I 0.790
NR2E3 Myotis lucifugus ENSMLUG00000008408 I 0.964
NR2E3 Macaca mulatta ENSMMUG00000019276 I 0.964
NR2E3 Monodelphis domestica ENSMODG00000001949 I 0.970
ENSMPUG00000017103 Mustela putorius furo ENSMPUG00000017103 I 0.964
ENSNLEG00000013807 Nomascus leucogenys ENSNLEG00000013807 I 0.964
ENSOARG00000018808 Ovis aries ENSOARG00000018808 I 0.964
NR2E3 Otolemur garnettii ENSOGAG00000006128 I 0.964
ENSONIG00000007109 Oreochromis niloticus ENSONIG00000007109 I 0.978
ENSONIG00000015396 Oreochromis niloticus ENSONIG00000015396 I 0.963
NR2E3 Ochotona princeps ENSOPRG00000006427 I 0.964
NR2E3 Oryzias latipes ENSORLG00000000011 I 0.978
nr2e3 Oryzias latipes ENSORLG00000007175 I 0.972
ENSPANG00000016257 Papio anubis ENSPANG00000016257 I 0.964
NR2E3 Procavia capensis ENSPCAG00000014733 I 0.964
ENSPFOG00000006106 Poecilia formosa ENSPFOG00000006106 I 0.978
ENSPFOG00000006516 Poecilia formosa ENSPFOG00000006516 I 0.972
ENSPMAG00000009792 Petromyzon marinus ENSPMAG00000009792 I 0.986
NR2E3 Pan troglodytes ENSPTRG00000007242 I 0.964
NR2E3 Pteropus vampyrus ENSPVAG00000009088 I 0.964
Nr2e3 Rattus norvegicus ENSRNOG00000050690 I 0.964
NR2E3 Sus scrofa ENSSSCG00000004978 I 0.962
ENSSTOG00000012080 Ictidomys tridecemlineatus ENSSTOG00000012080 I 0.964
NR2E3 Tupaia belangeri ENSTBEG00000011672 I 0.961
ENSTGUG00000004498 Taeniopygia guttata ENSTGUG00000004498 I 0.980
NR2E3 Tetraodon nigroviridis ENSTNIG00000005150 I 0.946
NR2E3 Takifugu rubripes ENSTRUG00000015582 I 0.978
NR2E3 Tursiops truncatus ENSTTRG00000009410 I 0.964
ENSXMAG00000010311 Xiphophorus maculatus ENSXMAG00000010311 I 0.978
ENSXMAG00000015842 Xiphophorus maculatus ENSXMAG00000015842 I 0.972
GF13031 Drosophila ananassae FBgn0090064 I 0.978
GH20426 Drosophila grimshawi FBgn0127889 I 0.978
GI19610 Drosophila mojavensis FBgn0142347 I 0.978
GL17752 Drosophila persimilis FBgn0155355 I 0.978
GD11109 Drosophila simulans FBgn0182865 I 0.978
GJ14974 Drosophila virilis FBgn0202177 I 0.978
GK20892 Drosophila willistoni FBgn0222886 I 0.978
GE13645 Drosophila yakuba FBgn0231304 I 0.978
GB49738 Apis mellifera GB49738 I 0.978
HelroG139475 Helobdella robusta HelroG139475 I 0.976
ISCW019467 Ixodes scapularis ISCW019467 I 0.784
L798_02234 Zootermopsis nevadensis L798_02234 I 0.976
LOAG_06205 Loa loa LOAG_06205 I 0.985
LotgiG137595 Lottia gigantea LotgiG137595 I 0.978
NEMVEDRAFT_v1g169225 Nematostella vectensis NEMVEDRAFT_v1g169225 I 0.802
NV14480 Nasonia vitripennis NV14480 I 0.978
PHUM039420 Pediculus humanus PHUM039420 I 0.978
PHUM331460 Pediculus humanus PHUM331460 I 0.752
Ppa-fax-1 Pristionchus pacificus PPA00264 I 0.984
Ppa-nhr-3 Pristionchus pacificus PPA28597 I 0.764
RPRC002557 Rhodnius prolixus RPRC002557 I 0.978
SMAR005628 Strigamia maritima SMAR005628 I 0.918
Smp_167770 Schistosoma mansoni Smp_167770 I 0.982
SPU_014405 Strongylocentrotus purpuratus SPU_014405 I 0.983
TC009378 Tribolium castaneum TC009378 I 0.978
tetur01g11040 Tetranychus urticae tetur01g11040 I 0.973
fax-1 Caenorhabditis elegans WBGene00001400 I 0.985
WBGene00240517 Onchocerca volvulus WBGene00240517 I 0.985
Aan_R004022 Calypte anna Aan_R004022 I 0.980
Afo_R007066 Aptenodytes forsteri Afo_R007066 I 0.980
Alligator_sinensis_CCG020979.1 Alligator sinensis Alligator_sinensis_CCG020979.1 I 0.978
Cmyd_10012017 Chelonia mydas Cmyd_10012017 I 0.978
ENSBTAP00000048604-D1 Bos grunniens ENSBTAP00000048604-D1 I 0.964
Gfo_R008863 Geospiza fortis Gfo_R008863 I 0.980
Hsal_07902--XP_396999.3_APIME Harpegnathos saltator Hsal_07902--XP_396999.3_APIME I 0.978
Myotis_brandtii_NR2E3_10027281 Myotis brandtii Myotis_brandtii_NR2E3_10027281 I 0.964
Ogr12843 Ophisaurus gracilis Ogr12843 I 0.978
Pvit_13689 Pogona vitticeps Pvit_13689 I 0.978
e_gw.107.44.1 Branchiostoma floridae e_gw.107.44.1 I 0.977
e_gw.324.28.1 Branchiostoma floridae e_gw.324.28.1 I 0.977
LDEC022044 Leptinotarsa decemlineata LDEC022044 I 0.978
SMU15029049 Schmidtea mediterranea SMU15029049 I 0.985
SMU15038222 Schmidtea mediterranea SMU15038222 I 0.985
nr2e3 Xenopus tropicalis XB-GENE-485801 I 0.976
AALB001133 Anopheles albimanus AALB001133 I 0.978
AARA003887 Anopheles arabiensis AARA003887 I 0.978
AATE003142 Anopheles atroparvus AATE003142 I 0.978
ACOM026748 Anopheles coluzzii ACOM026748 I 0.978
AEPI011067 Anopheles epiroticus AEPI011067 I 0.978
AFAF011447 Anopheles farauti AFAF011447 I 0.978
AMEM000983 Anopheles merus AMEM000983 I 0.978
BGLB004019 Biomphalaria glabrata BGLB004019 I 0.980
MDOA010244 Musca domestica MDOA010244 I 0.978
ANCCAN_05510 Ancylostoma caninum ANCCAN_05510 I 0.985
ANCCEY_01724 Ancylostoma ceylanicum ANCCEY_01724 I 0.985
ASU_07884 Ascaris suum ASU_07884 I 0.985
BTMF_0001091401 Brugia timori BTMF_0001091401 I 0.985
BXY_0327700 Bursaphelenchus xylophilus BXY_0327700 I 0.985
CGOC_0000187501 Cylicostephanus goldi CGOC_0000187501 I 0.985
csin100859 Clonorchis sinensis csin100859 I 0.987
D917_05007 Trichinella nativa D917_05007 I 0.976
D918_07443 Trichuris suis D918_07443 I 0.978
DICVIV_11193 Dictyocaulus viviparus DICVIV_11193 I 0.985
ECPE_0000243601 Echinostoma caproni ECPE_0000243601 I 0.985
EVEC_0000564801 Enterobius vermicularis EVEC_0000564801 I 0.979
genemark-nMf.1.1.scaf00188-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00188-processed-gene-0.4 I 0.984
GPLIN_000669800 Globodera pallida GPLIN_000669800 I 0.984
Hba_15323 Heterorhabditis bacteriophora Hba_15323 I 0.985
HCOI01781300 Haemonchus contortus HCOI01781300 I 0.985
L596_g2163 Steinernema carpocapsae L596_g2163 I 0.984
L889_g11978 Steinernema feltiae L889_g11978 I 0.984
L892_g9366 Steinernema scapterisci L892_g9366 I 0.984
L893_g28297 Steinernema glaseri L893_g28297 I 0.984
L898_g15355 Steinernema monticolum L898_g15355 I 0.984
MhA1_Contig1792.frz3.gene6 Meloidogyne hapla MhA1_Contig1792.frz3.gene6 I 0.984
nAv.1.0.1.g01891 Acanthocheilonema viteae nAv.1.0.1.g01891 I 0.984
nDi.2.2.2.g10236 Dirofilaria immitis nDi.2.2.2.g10236 I 0.984
nLs.2.1.2.g01701 Litomosoides sigmodontis nLs.2.1.2.g01701 I 0.985
nOo.2.0.1.g01040 Onchocerca ochengi nOo.2.0.1.g01040 I 0.985
nOo.2.0.1.g10097 Onchocerca ochengi nOo.2.0.1.g10097 I 0.985
nOo.2.0.1.g11611 Onchocerca ochengi nOo.2.0.1.g11611 I 0.985
OESDEN_00114 Oesophagostomum dentatum OESDEN_00114 I 0.867
OFLC_0000991001 Onchocerca flexuosa OFLC_0000991001 I 0.985
PTRK_0000446300 Parastrongyloides trichosuri PTRK_0000446300 I 0.984
RSKR_0000698500 Rhabditophanes kr3021 RSKR_0000698500 I 0.984
SBAD_0000006401 Soboliphyme baturini SBAD_0000006401 I 0.983
scaffold296-EXSNAP2012.8 Pristionchus exspectatus scaffold296-EXSNAP2012.8 I 0.984
scaffold395-EXSNAP2012.23 Pristionchus exspectatus scaffold395-EXSNAP2012.23 I 0.764
SMRZ_0000841101 Schistosoma margrebowiei SMRZ_0000841101 I 0.982
SMTD_0001566201 Schistosoma mattheei SMTD_0001566201 I 0.982
SMUV_0000245701 Syphacia muris SMUV_0000245701 I 0.980
snap_masked-nMf.1.1.scaf29070-processed-gene-0.1 Meloidogyne floridensis snap_masked-nMf.1.1.scaf29070-processed-gene-0.1 I 0.922
SPAL_0001117000 Strongyloides papillosus SPAL_0001117000 I 0.985
SSTP_0000090600 Strongyloides stercoralis SSTP_0000090600 I 0.985
SVE_0933400 Strongyloides venezuelensis SVE_0933400 I 0.985
TCLT_0000456401 Thelazia callipaeda TCLT_0000456401 I 0.984
TCNE_0001716001 Toxocara canis TCNE_0001716001 I 0.985
TELCIR_21617 Teladorsagia circumcincta TELCIR_21617 I 0.821
TRE_0000223201 Trichobilharzia regenti TRE_0000223201 I 0.983
TTRE_0000600201 Trichuris trichiura TTRE_0000600201 I 0.978