augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 (Meloidogyne floridensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 T308220_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.871 0.600
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.784 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0-mRNA-1 Nuclear receptor 13 82

Links

Other Nuclear receptor family TFs
Other Meloidogyne floridensis TFs

224 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
blmp-1 Caenorhabditis elegans WBGene00003847 D
Blimp-1 Drosophila melanogaster FBgn0035625 D
PPAI008567 Phlebotomus papatasi PPAI008567 I
DME_0000608401 Dracunculus medinensis DME_0000608401 I
D917_07972 Trichinella nativa D917_07972 I
BXY_0993100 Bursaphelenchus xylophilus BXY_0993100 I
BTMF_0000836601 Brugia timori BTMF_0000836601 I
ASU_05469 Ascaris suum ASU_05469 I
ANCDUO_02710 Ancylostoma duodenale ANCDUO_02710 I
ANCCEY_05862 Ancylostoma ceylanicum ANCCEY_05862 I
ANCCAN_13506 Ancylostoma caninum ANCCAN_13506 I
Hba_09212 Heterorhabditis bacteriophora Hba_09212 I
MDOA000384 Musca domestica MDOA000384 I
ASIS005657 Anopheles sinensis ASIS005657 I
AMEM000073 Anopheles merus AMEM000073 I
AMEC005588 Anopheles melas AMEC005588 I
AFUN002606 Anopheles funestus AFUN002606 I
AFAF006673 Anopheles farauti AFAF006673 I
ACUA020082 Anopheles culicifacies ACUA020082 I
ACOM039487 Anopheles coluzzii ACOM039487 I
nDi.2.2.2.g10740 Dirofilaria immitis nDi.2.2.2.g10740 I
TELCIR_19105 Teladorsagia circumcincta TELCIR_19105 I
TCNE_0001220201 Toxocara canis TCNE_0001220201 I
TCLT_0000472801 Thelazia callipaeda TCLT_0000472801 I
SVE_1713000 Strongyloides venezuelensis SVE_1713000 I
SSTP_0000757300 Strongyloides stercoralis SSTP_0000757300 I
SPAL_0000884500 Strongyloides papillosus SPAL_0000884500 I
SMUV_0001104401 Syphacia muris SMUV_0001104401 I
nOo.2.0.1.g07043 Onchocerca ochengi nOo.2.0.1.g07043 I
nLs.2.1.2.g09168 Litomosoides sigmodontis nLs.2.1.2.g09168 I
EVEC_0000549701 Enterobius vermicularis EVEC_0000549701 I
NBR_0002088601 Nippostrongylus brasiliensis NBR_0002088601 I
L898_g18820 Steinernema monticolum L898_g18820 I
L893_g23908 Steinernema glaseri L893_g23908 I
L889_g7623 Steinernema feltiae L889_g7623 I
L596_g21750 Steinernema carpocapsae L596_g21750 I
HPLM_0001789201 Haemonchus placei HPLM_0001789201 I
HCOI00760100 Haemonchus contortus HCOI00760100 I
LCUP008191 Lucilia cuprina LCUP008191 I
CBG02201 Caenorhabditis briggsae CBG02201 I
GJ13412 Drosophila virilis FBgn0200637 I
GM14713 Drosophila sechellia FBgn0169634 I
GH16462 Drosophila grimshawi FBgn0123933 I
GG15278 Drosophila erecta FBgn0107530 I
GF23985 Drosophila ananassae FBgn0100979 I
DAPPUDRAFT_319330 Daphnia pulex DAPPUDRAFT_319330 I
CRE29848 Caenorhabditis remanei CRE29848 I
CPIJ007425 Culex quinquefasciatus CPIJ007425 I
CBN18993 Caenorhabditis brenneri CBN18993 I
GK17303 Drosophila willistoni FBgn0219302 I
Bm3574 Brugia malayi Bm3574 I
BGIBMGA000319 Bombyx mori BGIBMGA000319 I
AGAP006592 Anopheles gambiae AGAP006592 I
ADAC005262 Anopheles darlingi ADAC005262 I
ACEP26221 Atta cephalotes ACEP26221 I
AAEL013770 Aedes aegypti AAEL013770 I
AAEL004255 Aedes aegypti AAEL004255 I
WUBG_04696 Wuchereria bancrofti WUBG_04696 I
NV12817 Nasonia vitripennis NV12817 I
CpipJ_CPIJ007425 Culex pipiens CpipJ_CPIJ007425 I
HHAL002221-PA Halyomorpha halys HHAL002221-PA I
CLEC009125 Cimex lectularius CLEC009125 I
Cflo_04377--XP_391847.3_APIME Camponotus floridanus Cflo_04377--XP_391847.3_APIME I
WBGene00238199 Onchocerca volvulus WBGene00238199 I
SMAR011793 Strigamia maritima SMAR011793 I
SINV14078 Solenopsis invicta SINV14078 I
RPRC001983 Rhodnius prolixus RPRC001983 I
AATE010559 Anopheles atroparvus AATE010559 I
MCINX009345 Melitaea cinxia MCINX009345 I
LOAG_11444 Loa loa LOAG_11444 I
L798_14234 Zootermopsis nevadensis L798_14234 I
KGM_16647 Danaus plexippus KGM_16647 I
HMEL007072 Heliconius melpomene HMEL007072 I
GB51060 Apis mellifera GB51060 I
GA23469 Drosophila pseudoobscura FBgn0244871 I
GE21501 Drosophila yakuba FBgn0238758 I