ENSPANG00000016994 (Papio anubis)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00292 (PAX) IPR001523 ENSPANG00000016994 T311764_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX8
M05685_2.00 		Homo sapiens
NRNBYRNYSRWGCGTGACSN
NSGTCACGCWYSRNYRVNYN		 SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX 		1.000 1.000
Pax8
M09624_2.00 		Rattus norvegicus
BCAGBCADSCRKGVM
KBCMYGSHTGVCTGV		 Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938 		1.000 1.000
PAX8
M11205_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX8_01 		1.000 1.000
PAX8
M11206_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX8_B 		1.000 1.000
PAX8
M05686_2.00 		Homo sapiens
NRNBCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGVNYN		 SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX 		1.000 1.000
pax2b
M02425_2.00 		Danio rerio
HVNYSRNSCR
YGSNYSRNBD		 PBM
Weirauch et al.(2014)
pTH8679 		0.936 0.936
Pax5B
M01301_2.00 		Gallus gallus
NSNDTNNNN
NNNNAHNSN		 PBM
Lambert et al.(2019)
pTH9781 		0.936 0.936
PAX5
M03443_2.00 		Homo sapiens
RNBYANYSAWSCGTRACN
NGTYACGSWTSRNTRVNY		 SELEX
Jolma et al.(2013)
PAX5_1 		0.936 0.936
PAX5
M08160_2.00 		Homo sapiens
RDGCGTGACCNN
NNGGTCACGCHY		 ChIP-seq
Mathelier et al.(2014)
MA0014.3 		0.936 0.936
PAX5
M07995_2.00 		Homo sapiens
BCAVYSRDSCRKRRC
GYYMYGSHYSRBTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha 		0.936 0.936
PAX5
M07996_2.00 		Homo sapiens
BCASYSRDSCRTRAC
GTYAYGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha 		0.936 0.936
PAX5
M07997_2.00 		Homo sapiens
CASYSRDSCRKRACN
NGTYMYGSHYSRSTG		 ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha 		0.936 0.936
PAX5
M07998_2.00 		Homo sapiens
BCASYSRDSCGKRRC
GYYMCGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha 		0.936 0.936
PAX5
M08227_2.00 		Homo sapiens
BCANYSRDGCGTRAM
KTYACGCHYSRNTGV		 ChIP-seq
Contrino et al.(2012)
Mv108 		0.936 0.936
PAX5
M08228_2.00 		Homo sapiens
AGCGTGRCYG
CRGYCACGCT		 ChIP-seq
Contrino et al.(2012)
Mv109 		0.936 0.936
PAX5
M09341_2.00 		Homo sapiens
SNVDGNKCARCVRAGCRDGAC
GTCHYGCTYBGYTGMNCHBNS		 Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A 		0.936 0.936
Pax5
M09342_2.00 		Mus musculus
VDRNBCAVYVRDSCRKRRM
KYYMYGSHYBRBTGVNYHB		 Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A 		0.936 0.936
PAX5
M09622_2.00 		Homo sapiens
BCASYSRDSCRTGRMN
NKYCAYGSHYSRSTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1 		0.936 0.936
PAX5
M09623_2.00 		Homo sapiens
BCABNVRSCGTGAC
GTCACGSYBNVTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2 		0.936 0.936
PAX5
M11208_2.00 		Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB
VNDSYSKCYMYNCWNCVNTGMNYNNNGV		 Transfac
Matys et al.(2006)
V$PAX5_01 		0.936 0.936
PAX5
M11209_2.00 		Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH
DBNRYBGTYMCGCTYNAVVHNHCHBDYB		 Transfac
Matys et al.(2006)
V$PAX5_02 		0.936 0.936
PAX5
M11210_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_06 		0.936 0.936
PAX5
M11211_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_07 		0.936 0.936
PAX5
M11212_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_Q6 		0.936 0.936
pax2
M02428_2.00 		Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN		 PBM
Weirauch et al.(2014)
pTH8556 		0.928 0.928
sv
M01302_2.00 		Drosophila melanogaster
NNNSCRBRDM
KHYVYGSNNN		 PBM
Lambert et al.(2019)
pTH9773 		0.832 0.832
sv
M03949_2.00 		Drosophila melanogaster
NBCRNYSAWGCGTGACS
SGTCACGCWTSRNYGVN		 SELEX
Nitta et al.(2015)
sv_1 		0.832 0.832
sv
M06438_2.00 		Drosophila melanogaster
RNYSRDSCGTRACNN
NNGTYACGSHYSRNY		 B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561 		0.832 0.832
PAX1
M03442_2.00 		Homo sapiens
DBCANTSAWGCGTGACS
SGTCACGCWTSANTGVH		 SELEX
Jolma et al.(2013)
PAX1_1 		0.728 0.728
Poxn
M03946_2.00 		Drosophila melanogaster
DGCGTGACSGTCACGSY
RSCGTGACSGTCACGCH		 SELEX
Nitta et al.(2015)
Poxn_1 		0.728 0.728
Poxn
M03947_2.00 		Drosophila melanogaster
RSCGKGACSGTTMCGSW
WSCGKAACSGTCMCGSY		 SELEX
Nitta et al.(2015)
Poxn_2 		0.728 0.728
Poxn
M03948_2.00 		Drosophila melanogaster
NCGTTCCGGAACGD
HCGTTCCGGAACGN		 SELEX
Nitta et al.(2015)
Poxn_3 		0.728 0.728
PAX1
M05687_2.00 		Homo sapiens
BCRNTSRWGCGTGACSN
NSGTCACGCWYSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_HT-SELEX 		0.728 0.728
Poxn
M06437_2.00 		Drosophila melanogaster
RSCGTGACG
CGTCACGSY		 B1H
Zhu et al.(2011)
Poxn_SOLEXA_5_FBgn0003130 		0.728 0.728
PAX1
M11207_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX1_B 		0.728 0.728
PAX1
M05688_2.00 		Homo sapiens
BCRNTSAWGCGTGACSN
NSGTCACGCWTSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_Methyl-HT-SELEX 		0.728 0.728
PAX7
M00346_2.00 		Homo sapiens
NGTYAYGSHN
NDSCRTRACN		 PBM
Barrera et al.(2016)
PAX7_REF 		0.720 0.720
egl-38
M02426_2.00 		Caenorhabditis elegans
ACCGTGAYCAC
GTGRTCACGGT		 PBM
Weirauch et al.(2014)
pTH8981 		0.720 0.720
pax-2
M00706_2.00 		Caenorhabditis elegans
RMSCRTRACS
SGTYAYGSKY		 PBM
Narasimhan et al.(2015)
pTH10794 		0.720 0.720
PAX9
M03444_2.00 		Homo sapiens
NKCANTSAWGCGTGACS
SGTCACGCWTSANTGMN		 SELEX
Jolma et al.(2013)
PAX9_1 		0.720 0.720
PAX9
M05689_2.00 		Homo sapiens
BHRNYSRDSCGTRACSN
NSGTYACGSHYSRNYDV		 SELEX
Yin et al.(2017)
PAX9_eDBD_HT-SELEX 		0.720 0.720
PAX9
M05690_2.00 		Homo sapiens
BCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGV		 SELEX
Yin et al.(2017)
PAX9_eDBD_Methyl-HT-SELEX 		0.720 0.720
Poxm
M03944_2.00 		Drosophila melanogaster
CAVTCAWGCGTGACR
YGTCACGCWTGABTG		 SELEX
Nitta et al.(2015)
Poxm_1 		0.712 0.712
Poxm
M03945_2.00 		Drosophila melanogaster
NYSAWGCRTRACS
SGTYAYGCWTSRN		 SELEX
Nitta et al.(2015)
Poxm_2 		0.712 0.712
Poxm
M06436_2.00 		Drosophila melanogaster
NNNNNNMVNHNRNSCRTGA
TCAYGSNYNDNBKNNNNNN		 B1H
Zhu et al.(2011)
Poxm_SOLEXA_5_FBgn0003129 		0.712 0.712
pax9
M11204_2.00 		Danio rerio Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX9_B 		0.712 0.712
PAX7
M00345_2.00 		Homo sapiens
NSGTCACGSN
NSCGTGACSN		 PBM
Barrera et al.(2016)
PAX7_P112L 		0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPANP00000003667 Paired box 9 133

Links

Other Paired box family TFs
Other Papio anubis TFs

546 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00022p00190540 Amborella trichopoda AMTR_s00022p00190540 I
BGIOSGA014151 Oryza indica BGIOSGA014151 I
Bo9g175820 Brassica oleracea Bo9g175820 I
Bra009228 Brassica rapa Bra009228 I
Bra014348 Brassica rapa Bra014348 I
BRADI5G25320 Brachypodium distachyon BRADI5G25320 I
GLYMA18G43130 Glycine max GLYMA18G43130 I
GLYMA18G43550 Glycine max GLYMA18G43550 I
GRMZM2G035370 Zea mays GRMZM2G035370 I
GRMZM2G124495 Zea mays GRMZM2G124495 I
GSMUA_Achr4G19300_001 Musa acuminata GSMUA_Achr4G19300_001 I
GSMUA_Achr7G06370_001 Musa acuminata GSMUA_Achr7G06370_001 I
LPERR04G24240 Leersia perrieri LPERR04G24240 I
OB04G35670 Oryza brachyantha OB04G35670 I
OBART04G28680 Oryza barthii OBART04G28680 I
OGLUM04G28560 Oryza glumaepatula OGLUM04G28560 I
OLONG_005000 Oryza longistaminata OLONG_005000 I
OMERI04G24260 Oryza meridionalis OMERI04G24260 I
ONIVA04G27220 Oryza nivara ONIVA04G27220 I
OPUNC04G26200 Oryza punctata OPUNC04G26200 I
ORGLA04G0249600 Oryza glaberrima ORGLA04G0249600 I
ORUFI04G30350 Oryza rufipogon ORUFI04G30350 I
OS04G0665600 Oryza sativa OS04G0665600 I
PGSC0003DMG400015893 Solanum tuberosum PGSC0003DMG400015893 I
PGSC0003DMG400030032 Solanum tuberosum PGSC0003DMG400030032 I
POPTR_0006s10190 Populus trichocarpa POPTR_0006s10190 I
POPTR_0016s12430 Populus trichocarpa POPTR_0016s12430 I
PRUPE_ppa021540mg Prunus persica PRUPE_ppa021540mg I
Sb06g031970 Sorghum bicolor Sb06g031970 I
SELMODRAFT_228335 Selaginella moellendorffii SELMODRAFT_228335 I
SELMODRAFT_270428 Selaginella moellendorffii SELMODRAFT_270428 I
Si022099m.g Setaria italica Si022099m.g I
Solyc06g051060.2 Solanum lycopersicum Solyc06g051060.2 I
Solyc10g076460.1 Solanum lycopersicum Solyc10g076460.1 I
TCM_021688 Theobroma cacao TCM_021688 I
VIT_08s0007g06180 Vitis vinifera VIT_08s0007g06180 I
VIT_08s0007g06310 Vitis vinifera VIT_08s0007g06310 I
VIT_08s0105g00370 Vitis vinifera VIT_08s0105g00370 I
VIT_13s0156g00390 Vitis vinifera VIT_13s0156g00390 I
Cla018361 Citrullus lanatus Cla018361 I
29701.m000580 Ricinus communis 29701.m000580 I
Cucsa.130050 Cucumis sativus Cucsa.130050 I
est_orfs.1_306_4269596:1 Micromonas pusilla est_orfs.1_306_4269596:1 I
Aquca_004_00369 Aquilegia coerulea Aquca_004_00369 I
Ciclev10013453m.g Citrus clementina Ciclev10013453m.g I
Eucgr.A00517 Eucalyptus grandis Eucgr.A00517 I
EuGene.0700010469 Micromonas sp RCC299 EuGene.0700010469 I
evm.TU.supercontig_120.33 Carica papaya evm.TU.supercontig_120.33 I
gene13487-v1.0-hybrid Fragaria vesca gene13487-v1.0-hybrid I
Gorai.002G265400 Gossypium raimondii Gorai.002G265400 I
Gorai.012G117800 Gossypium raimondii Gorai.012G117800 I
Lus10004809.g Linum usitatissimum Lus10004809.g I
Lus10005036.g Linum usitatissimum Lus10005036.g I
Lus10027806.g Linum usitatissimum Lus10027806.g I
Lus10038734.g Linum usitatissimum Lus10038734.g I
Lus10039124.g Linum usitatissimum Lus10039124.g I
MDP0000142146 Malus domestica MDP0000142146 I
MDP0000182154 Malus domestica MDP0000182154 I
orange1.1g025728m.g Citrus sinensis orange1.1g025728m.g I
Pavir.Ga00160 Panicum virgatum Pavir.Ga00160 I
PK15677.1 Cannabis sativa PK15677.1 I
chr1.LjB18K24.110.nd Lotus japonicus chr1.LjB18K24.110.nd I
AT5G06800 Arabidopsis thaliana AT5G06800 N
Bo2g007410 Brassica oleracea Bo2g007410 N
Bo3g004040 Brassica oleracea Bo3g004040 N
Bra005912 Brassica rapa Bra005912 N
Bra028717 Brassica rapa Bra028717 N
fgenesh2_kg.6__627__AT5G06800.1 Arabidopsis lyrata fgenesh2_kg.6__627__AT5G06800.1 N
GLYMA02G30800 Glycine max GLYMA02G30800 N
GLYMA09G17404 Glycine max GLYMA09G17404 N
MTR_1g053835 Medicago truncatula MTR_1g053835 N
MTR_7g068600 Medicago truncatula MTR_7g068600 N
MTR_7g093030 Medicago truncatula MTR_7g093030 N
PGSC0003DMG400011435 Solanum tuberosum PGSC0003DMG400011435 N
PGSC0003DMG400023674 Solanum tuberosum PGSC0003DMG400023674 N
POPTR_0006s20540 Populus trichocarpa POPTR_0006s20540 N
POPTR_0016s04830 Populus trichocarpa POPTR_0016s04830 N
PRUPE_ppa016067mg Prunus persica PRUPE_ppa016067mg N
Solyc02g080740.1 Solanum lycopersicum Solyc02g080740.1 N
Solyc10g078720.1 Solanum lycopersicum Solyc10g078720.1 N
Solyc10g080460.1 Solanum lycopersicum Solyc10g080460.1 N
TCM_024886 Theobroma cacao TCM_024886 N
VIT_13s0156g00370 Vitis vinifera VIT_13s0156g00370 N
Ca_14198 Cicer arietinum Ca_14198 N
Cla011853 Citrullus lanatus Cla011853 N
Pm025973 Prunus mume Pm025973 N
28582.m000316 Ricinus communis 28582.m000316 N
30226.m001993 Ricinus communis 30226.m001993 N
cassava12254.valid.m1 Manihot esculenta cassava12254.valid.m1 N
cassava12255.valid.m1 Manihot esculenta cassava12255.valid.m1 N
cassava39743.m1 Manihot esculenta cassava39743.m1 N
Cucsa.353890 Cucumis sativus Cucsa.353890 N
mgf007532m Mimulus guttatus mgf007532m N
mgf007985m Mimulus guttatus mgf007985m N
mgf015795m Mimulus guttatus mgf015795m N
Aquca_009_00165 Aquilegia coerulea Aquca_009_00165 N
Aquca_012_00204 Aquilegia coerulea Aquca_012_00204 N
Bostr.13129s0292 Boechera stricta Bostr.13129s0292 N
Cagra.8005s0016 Capsella grandiflora Cagra.8005s0016 N
Carubv10003217m.g Capsella rubella Carubv10003217m.g N
Ciclev10012014m.g Citrus clementina Ciclev10012014m.g N
Ciclev10033388m.g Citrus clementina Ciclev10033388m.g N
evm.TU.supercontig_85.82 Carica papaya evm.TU.supercontig_85.82 N
gene22647-v1.0-hybrid Fragaria vesca gene22647-v1.0-hybrid N
Gorai.002G225400 Gossypium raimondii Gorai.002G225400 N
Gorai.006G142000 Gossypium raimondii Gorai.006G142000 N
Lus10021035.g Linum usitatissimum Lus10021035.g N
Lus10023816.g Linum usitatissimum Lus10023816.g N
MDP0000184307 Malus domestica MDP0000184307 N
MDP0000253656 Malus domestica MDP0000253656 N
MDP0000280005 Malus domestica MDP0000280005 N
orange1.1g018583m.g Citrus sinensis orange1.1g018583m.g N
orange1.1g035950m.g Citrus sinensis orange1.1g035950m.g N
SapurV1A.0008s0360 Salix purpurea SapurV1A.0008s0360 N
SapurV1A.0018s0530 Salix purpurea SapurV1A.0018s0530 N
SapurV1A.0251s0040 Salix purpurea SapurV1A.0251s0040 N
SapurV1A.4156s0010 Salix purpurea SapurV1A.4156s0010 N
Thhalv10013850m.g Eutrema salsugineum Thhalv10013850m.g N
PK00827.1 Cannabis sativa PK00827.1 N
chr1.LjT38A19.30.nc Lotus japonicus chr1.LjT38A19.30.nc N
PDK_20s1349221g001 Phoenix dactylifera PDK_20s1349221g001 N