RELB (Callithrix jacchus)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSCJAG00000012991 T317070_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RELB
M08161_2.00 		Homo sapiens
NNATTCCCCNN
NNGGGGAATNN		 ChIP-seq
Mathelier et al.(2014)
MA1117.1 		0.988 0.988
RELB
M09347_2.00 		Homo sapiens
VGGGRMTTTSMH
DKSAAAKYCCCB		 Misc
Kulakovskiy et al.(2013)
RELB_HUMAN.H11MO.0.C 		0.988 0.988
RELB
M11227_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELBP50_Q3 		0.988 0.988
Relb
M09352_2.00 		Mus musculus
VGGGRMTTTSMH
DKSAAAKYCCCB		 Misc
Kulakovskiy et al.(2013)
RELB_MOUSE.H11MO.0.C 		0.977 0.977
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000023871 Rel 126 294
ENSCJAP00000043075 Rel 126 168

Links

Other Rel family TFs
Other Callithrix jacchus TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G05550 Arabidopsis thaliana AT5G05550 D
Thhalv10021383m.g Eutrema salsugineum Thhalv10021383m.g I
AT3G11100 Arabidopsis thaliana AT3G11100 I
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I
evm.TU.supercontig_19.152 Carica papaya evm.TU.supercontig_19.152 I
Carubv10014421m.g Capsella rubella Carubv10014421m.g I
Carubv10001830m.g Capsella rubella Carubv10001830m.g I
Cagra.1504s0056 Capsella grandiflora Cagra.1504s0056 I
Bostr.19424s1046 Boechera stricta Bostr.19424s1046 I
29814.m000741 Ricinus communis 29814.m000741 I
scaffold_301280.1 Arabidopsis lyrata scaffold_301280.1 I
PRUPE_ppa010427mg Prunus persica PRUPE_ppa010427mg I
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I
Bra034866 Brassica rapa Bra034866 I
Bra034165 Brassica rapa Bra034165 I
Bo9g177060 Brassica oleracea Bo9g177060 I
Bo5g136850 Brassica oleracea Bo5g136850 I
MDP0000097759 Malus domestica MDP0000097759 N