deaf1 (Oryzias latipes)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSORLG00000019407 T321848_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DEAF1
M11266_2.00
Pan troglodytes Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_01
0.944 0.763
DEAF1
M11267_2.00
Pan troglodytes Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_02
0.944 0.763
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000024165 SAND 147 222

Links

Other SAND family TFs
Other Oryzias latipes TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Carubv10023033m.g Capsella rubella Carubv10023033m.g N
chr4.CM0042.1400.nc Lotus japonicus chr4.CM0042.1400.nc N
PK11431.1 Cannabis sativa PK11431.1 N
Thhalv10001406m.g Eutrema salsugineum Thhalv10001406m.g N
SapurV1A.0596s0020 Salix purpurea SapurV1A.0596s0020 N
SapurV1A.0287s0020 Salix purpurea SapurV1A.0287s0020 N
SapurV1A.0179s0360 Salix purpurea SapurV1A.0179s0360 N
orange1.1g048759m.g Citrus sinensis orange1.1g048759m.g N
Gorai.003G090600 Gossypium raimondii Gorai.003G090600 N
evm.TU.supercontig_151.12 Carica papaya evm.TU.supercontig_151.12 N
Eucgr.F02687 Eucalyptus grandis Eucgr.F02687 N
Ciclev10000930m.g Citrus clementina Ciclev10000930m.g N
Bo4g021230 Brassica oleracea Bo4g021230 N
Cagra.1517s0032 Capsella grandiflora Cagra.1517s0032 N
Bostr.25993s0368 Boechera stricta Bostr.25993s0368 N
Aquca_009_00307 Aquilegia coerulea Aquca_009_00307 N
mgf008193m Mimulus guttatus mgf008193m N
cassava22183.valid.m1 Manihot esculenta cassava22183.valid.m1 N
Cla017427 Citrullus lanatus Cla017427 N
Ca_10412 Cicer arietinum Ca_10412 N
TCM_001393 Theobroma cacao TCM_001393 N
scaffold_403309.1 Arabidopsis lyrata scaffold_403309.1 N
POPTR_0013s12100 Populus trichocarpa POPTR_0013s12100 N
Bra004800 Brassica rapa Bra004800 N