GLYMA13G08390 (Glycine max)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 GLYMA13G08390 T323840_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G08390.2 Sigma 70 278 349
GLYMA13G08390.3 Sigma 70 278 349
GLYMA13G08390.4 Sigma 70 254 325
GLYMA13G08390.5 Sigma 70 254 325

Links

Other Sigma 70 family TFs
Other Glycine max TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.8922s0001 Capsella grandiflora Cagra.8922s0001 N 0.797
TCM_015349 Theobroma cacao TCM_015349 N 0.884
Traes_1AL_0C41C44B1 Triticum aestivum Traes_1AL_0C41C44B1 N 0.739
TRIUR3_33378 Triticum urartu TRIUR3_33378 N 0.739
SIGE Vitis vinifera VIT_16s0050g02520 N 0.870
Ca_03953 Cicer arietinum Ca_03953 N 0.870
Cla004302 Citrullus lanatus Cla004302 N 0.884
Pm019782 Prunus mume Pm019782 N 0.812
30169.m006532 Ricinus communis 30169.m006532 N 0.884
cassava29286.valid.m1 Manihot esculenta cassava29286.valid.m1 N 0.812
cassava7220.valid.m1 Manihot esculenta cassava7220.valid.m1 N 0.899
Cucsa.012950 Cucumis sativus Cucsa.012950 N 0.884
mgf001401m Mimulus guttatus mgf001401m N 0.855
mgf006107m Mimulus guttatus mgf006107m N 0.841
Aquca_037_00091 Aquilegia coerulea Aquca_037_00091 N 0.841
Bostr.10199s0021 Boechera stricta Bostr.10199s0021 N 0.797
Solyc03g007370.2 Solanum lycopersicum Solyc03g007370.2 N 0.797
Carubv10000608m.g Capsella rubella Carubv10000608m.g N 0.797
Ciclev10004760m.g Citrus clementina Ciclev10004760m.g N 0.870
evm.TU.supercontig_3.54 Carica papaya evm.TU.supercontig_3.54 N 0.870
gene13107-v1.0-hybrid Fragaria vesca gene13107-v1.0-hybrid N 0.870
Gorai.008G270500 Gossypium raimondii Gorai.008G270500 N 0.870
Lus10014934.g Linum usitatissimum Lus10014934.g N 0.841
MDP0000831937 Malus domestica MDP0000831937 N 0.841
orange1.1g010092m.g Citrus sinensis orange1.1g010092m.g N 0.870
Pavir.J13718 Panicum virgatum Pavir.J13718 N 0.768
SapurV1A.0377s0060 Salix purpurea SapurV1A.0377s0060 N 0.841
SapurV1A.1227s0040 Salix purpurea SapurV1A.1227s0040 N 0.855
SapurV1A.4845s0010 Salix purpurea SapurV1A.4845s0010 N 0.855
Thhalv10004166m.g Eutrema salsugineum Thhalv10004166m.g N 0.783
PK06897.1 Cannabis sativa PK06897.1 N 0.841
MTR_3g090900 Medicago truncatula MTR_3g090900 N 0.841
BGIOSGA020460 Oryza indica BGIOSGA020460 N 0.739
Bo7g097160 Brassica oleracea Bo7g097160 N 0.743
Bo9g013770 Brassica oleracea Bo9g013770 N 0.783
Bra009735 Brassica rapa Bra009735 N 0.743
Bra026466 Brassica rapa Bra026466 N 0.783
F775_08366 Aegilops tauschii F775_08366 N 0.739
SIGE Arabidopsis lyrata fgenesh2_kg.6__2403__AT5G24120.1 N 0.783
GLYMA04G41691 Glycine max GLYMA04G41691 N 0.913
GLYMA06G13100 Glycine max GLYMA06G13100 N 0.899
GLYMA14G31370 Glycine max GLYMA14G31370 N 0.971
GRMZM2G077436 Zea mays GRMZM2G077436 N 0.710
GSMUA_Achr7G24590_001 Musa acuminata GSMUA_Achr7G24590_001 N 0.841
LPERR05G23180 Leersia perrieri LPERR05G23180 N 0.739
MLOC_61094 Hordeum vulgare MLOC_61094 N 0.739
SIGE Arabidopsis thaliana AT5G24120 N 0.783
OB05G35020 Oryza brachyantha OB05G35020 N 0.739
OBART05G27520 Oryza barthii OBART05G27520 N 0.739
OGLUM05G29030 Oryza glumaepatula OGLUM05G29030 N 0.739
OLONG_028119 Oryza longistaminata OLONG_028119 N 0.739
OMERI05G23510 Oryza meridionalis OMERI05G23510 N 0.739
ONIVA05G29570 Oryza nivara ONIVA05G29570 N 0.739
OPUNC05G25110 Oryza punctata OPUNC05G25110 N 0.739
ORGLA05G0239100 Oryza glaberrima ORGLA05G0239100 N 0.739
ORUFI05G29480 Oryza rufipogon ORUFI05G29480 N 0.739
PGSC0003DMG400009072 Solanum tuberosum PGSC0003DMG400009072 N 0.826
POPTR_0012s01430 Populus trichocarpa POPTR_0012s01430 N 0.841
PRUPE_ppa004259mg Prunus persica PRUPE_ppa004259mg N 0.855
Sb09g030110 Sorghum bicolor Sb09g030110 N 0.739
Si021904m.g Setaria italica Si021904m.g N 0.739