CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KNAG_0A07060
(
Kazachstania naganishii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
KNAG_0A07060
T330804_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IXR1
M08429_2.00
Saccharomyces cerevisiae
CMCCGCTYCCGGYTT
AARCCGGRAGCGGKG
ChIP-chip
Mathelier et al.(2014)
MA0323.1
0.694
0.846
IXR1
M11345_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$IXR1_01
0.694
0.846
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCK68360
Sox
379
447
PKRPSSAYFLFSMSIRNDLLQQYPDAKVPELSKLASARWKELTDDQKKPFYDEFRTNWDKYRVLRDEYE
CCK68360
Sox
452
518
PKRPSGPFIQFTQEIRPTIVKENPEKNLIEITKLIGERWRSLDPVEKTRYTDTYKLKLKEWEKCYPT
Links
Other
Sox
family TFs
Other
Kazachstania naganishii
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
IXR1
Saccharomyces cerevisiae
YKL032C
D
0.694
TBLA_0G02260
Tetrapisispora blattae
TBLA_0G02260
I
0.699
SAKL0A09548g
Lachancea kluyveri
SAKL0A09548g
I
0.585
Kwal_8043
Kluyveromyces waltii
Kwal_8043
I
0.641
KLTH0D06908g
Kluyveromyces thermotolerans
KLTH0D06908g
I
0.635
14658_YKL032C
Saccharomyces bayanus
14658_YKL032C
I
0.694
13606_Multiple
Saccharomyces paradoxus
13606_Multiple
I
0.576
13553_YKL032C
Saccharomyces mikatae
13553_YKL032C
I
0.694
ZYRO0B02068g
Zygosaccharomyces rouxii
ZYRO0B02068g
I
0.709
ZBAI_09505
Zygosaccharomyces bailii
ZBAI_09505
I
0.724
ZBAI_03824
Zygosaccharomyces bailii
ZBAI_03824
I
0.724
TPHA_0G03540
Tetrapisispora phaffii
TPHA_0G03540
I
0.686
TDEL_0A03100
Torulaspora delbrueckii
TDEL_0A03100
I
0.722
AACERI_AaceriAGL073CA
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAGL073CA
I
0.655
SU7_2018
Saccharomyces arboricola
SU7_2018
I
0.694
NDAI_0K01850
Naumovozyma dairenensis
NDAI_0K01850
I
0.718
NCAS_0A04790
Naumovozyma castellii
NCAS_0A04790
I
0.718
LALA0_S02e01376g
Lachancea lanzarotensis
LALA0_S02e01376g
I
0.630
Kpol_348p11
Vanderwaltozyma polyspora
Kpol_348p11
I
0.686
KLTH0D06908g
Lachancea thermotolerans
KLTH0D06908g
I
0.635
KLLA0_E18481g
Kluyveromyces lactis
KLLA0_E18481g
I
0.596
KAFR_0J00330
Kazachstania africana
KAFR_0J00330
I
0.729
Ecym_7252
Eremothecium cymbalariae
Ecym_7252
I
0.646
CAGL0L02013g
Candida glabrata
CAGL0L02013g
I
0.686
AGOS_AGL073CA
Ashbya gossypii
AGOS_AGL073CA
I
0.655