PAS_chr3_1149 (Komagataella pastoris)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PAS_chr3_1149 T331762_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CAY70001 Sox 462 478
CAY70001 Sox 520 568

Links

Other Sox family TFs
Other Komagataella pastoris TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgeneshTM_pg.C_10542 Tremella mesenterica estExt_fgeneshTM_pg.C_10542 N 0.438
PGSC0003DMG400001413 Solanum tuberosum PGSC0003DMG400001413 N 0.417
Phatr3_J33840 Phaeodactylum tricornutum Phatr3_J33840 N 0.418
RHTO_04537 Rhodosporidium toruloides RHTO_04537 N 0.570
SCHCODRAFT_110960 Schizophyllum commune SCHCODRAFT_110960 N 0.441
sr12520 Sporisorium reilianum sr12520 N 0.504
Thaps12024 Thalassiosira pseudonana Thaps12024 N 0.422
Thaps5285 Thalassiosira pseudonana Thaps5285 N 0.415
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.545
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.487
UM01457 Ustilago maydis UM01457 N 0.430
X797_001779 Metarhizium robertsii X797_001779 N 0.449
NCLIV_023590 Neospora caninum NCLIV_023590 N 0.431
fgenesh1_pg.C_scaffold_11000089 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000089 N 0.554
MYCTH_2294733 Myceliophthora thermophila MYCTH_2294733 N 0.426
estExt_Genewise1.C_120062 Heterobasidion annosum estExt_Genewise1.C_120062 N 0.486
Kwal_9519 Kluyveromyces waltii Kwal_9519 N 0.525
SAKL0C03872g Lachancea kluyveri SAKL0C03872g N 0.539
SAKL0C03916g Lachancea kluyveri SAKL0C03916g N 0.539
SAKL0C10648g Lachancea kluyveri SAKL0C10648g N 0.508
SAKL0D09922g Lachancea kluyveri SAKL0D09922g N 0.550
SAKL0H00726g Lachancea kluyveri SAKL0H00726g N 0.572
XP_002492281.1 Pichia pastoris XP_002492281.1 N 0.741
ASIM_0001132301 Anisakis simplex ASIM_0001132301 N 0.416
EVEC_0001251901 Enterobius vermicularis EVEC_0001251901 N 0.420
GPLIN_000170600 Globodera pallida GPLIN_000170600 N 0.472
MCOS_0000664501 Mesocestoides corti MCOS_0000664501 N 0.514
K437DRAFT_266676 Tilletiaria anomala K437DRAFT_266676 N 0.503
AACERI_AaceriAGL345W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL345W N 0.451
AGOS_AGL345W Ashbya gossypii AGOS_AGL345W N 0.428
AWRI1499_2837 Brettanomyces bruxellensis AWRI1499_2837 N 0.564
BGIBMGA006156 Bombyx mori BGIBMGA006156 N 0.547
BN7_5943 Wickerhamomyces ciferrii BN7_5943 N 0.531
CC1G_07855 Coprinopsis cinerea CC1G_07855 N 0.431
CMQ_7998 Grosmannia clavigera CMQ_7998 N 0.482
TCF7L2 Tursiops truncatus ENSTTRG00000002360 N 0.444
GLOINDRAFT_9339 Rhizophagus irregularis GLOINDRAFT_9339 N 0.501
HelroG178674 Helobdella robusta HelroG178674 N 0.422
HETIRDRAFT_460226 Heterobasidion irregulare HETIRDRAFT_460226 N 0.486
HPODL_02662 Ogataea parapolymorpha HPODL_02662 N 0.614
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N 0.547
A1Q1_02593 Trichosporon asahii A1Q1_02593 N 0.515
K437DRAFT_66818 Tilletiaria anomala K437DRAFT_66818 N 0.483
KUCA_T00004799001 Kuraishia capsulata KUCA_T00004799001 N 0.579
LALA0_S01e08702g Lachancea lanzarotensis LALA0_S01e08702g N 0.446
LALA0_S10e00254g Lachancea lanzarotensis LALA0_S10e00254g N 0.544
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N 0.527
MAC_03708 Metarhizium acridum MAC_03708 N 0.449
MAJ_01270 Metarhizium majus MAJ_01270 N 0.449
MAM_02299 Metarhizium album MAM_02299 N 0.429
MBR_01289 Metarhizium brunneum MBR_01289 N 0.449
Moror_8439 Moniliophthora roreri Moror_8439 N 0.548
MPER_12197 Moniliophthora perniciosa MPER_12197 N 0.551
MVLG_01553 Microbotryum violaceum MVLG_01553 N 0.571