CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PHACADRAFT_23667
(
Phanerochaete carnosa
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PHACADRAFT_23667
T331887_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKM60254
Sox
68
136
PKRPMNAFMIFARKRRPQISAANQMMRTGDISKILSKEWNAMEMAEKKFYLDQAKKLKDNFNNKYPDYV
Links
Other
Sox
family TFs
Other
Phanerochaete carnosa
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene31955-v1.0-hybrid
Fragaria vesca
gene31955-v1.0-hybrid
I
0.000
chr2.CM0308.470.nd
Lotus japonicus
chr2.CM0308.470.nd
I
0.000
chr2.CM0262.200.nc
Lotus japonicus
chr2.CM0262.200.nc
I
0.000
PK10791.1
Cannabis sativa
PK10791.1
I
0.000
SapurV1A.0090s0340
Salix purpurea
SapurV1A.0090s0340
I
0.000
Gorai.013G040000
Gossypium raimondii
Gorai.013G040000
I
0.000
Gorai.012G150900
Gossypium raimondii
Gorai.012G150900
I
0.000
Gorai.005G240900
Gossypium raimondii
Gorai.005G240900
I
0.000
Gorai.002G006500
Gossypium raimondii
Gorai.002G006500
I
0.000
GLYMA07G21160
Glycine max
GLYMA07G21160
I
0.000
cassava29880.valid.m1
Manihot esculenta
cassava29880.valid.m1
I
0.000
29851.m002498
Ricinus communis
29851.m002498
I
0.000
Cla010445
Citrullus lanatus
Cla010445
I
0.000
TCM_006971
Theobroma cacao
TCM_006971
I
0.000
PRUPE_ppa006275mg
Prunus persica
PRUPE_ppa006275mg
I
0.000
POPTR_0009s11170
Populus trichocarpa
POPTR_0009s11170
I
0.000
Cucsa.110000
Cucumis sativus
Cucsa.110000
N
0.000
Pm021537
Prunus mume
Pm021537
N
0.000
Ca_14825
Cicer arietinum
Ca_14825
N
0.000
Lus10012041.g
Linum usitatissimum
Lus10012041.g
N
0.000
MDP0000555456
Malus domestica
MDP0000555456
N
0.000
GLYMA20G01130
Glycine max
GLYMA20G01130
N
0.000