XP_002492281.1 (Pichia pastoris)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 XP_002492281.1 T335363_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002492281.1 Sox 462 478
XP_002492281.1 Sox 520 568

Links

Other Sox family TFs
Other Pichia pastoris TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pg.C_scaffold_11000089 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000089 N 0.554
PAS_chr3_1149 Komagataella pastoris PAS_chr3_1149 N 0.741
PGSC0003DMG400001413 Solanum tuberosum PGSC0003DMG400001413 N 0.417
Phatr3_J33840 Phaeodactylum tricornutum Phatr3_J33840 N 0.418
RHTO_04537 Rhodosporidium toruloides RHTO_04537 N 0.570
SCHCODRAFT_110960 Schizophyllum commune SCHCODRAFT_110960 N 0.441
sr12520 Sporisorium reilianum sr12520 N 0.504
Thaps12024 Thalassiosira pseudonana Thaps12024 N 0.422
Thaps5285 Thalassiosira pseudonana Thaps5285 N 0.415
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.545
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.487
UM01457 Ustilago maydis UM01457 N 0.430
X797_001779 Metarhizium robertsii X797_001779 N 0.449
NCLIV_023590 Neospora caninum NCLIV_023590 N 0.431
MYCTH_2294733 Myceliophthora thermophila MYCTH_2294733 N 0.426
estExt_fgeneshTM_pg.C_10542 Tremella mesenterica estExt_fgeneshTM_pg.C_10542 N 0.438
estExt_Genewise1.C_120062 Heterobasidion annosum estExt_Genewise1.C_120062 N 0.486
Kwal_9519 Kluyveromyces waltii Kwal_9519 N 0.525
SAKL0C03872g Lachancea kluyveri SAKL0C03872g N 0.539
SAKL0C03916g Lachancea kluyveri SAKL0C03916g N 0.539
SAKL0C10648g Lachancea kluyveri SAKL0C10648g N 0.508
SAKL0D09922g Lachancea kluyveri SAKL0D09922g N 0.550
SAKL0H00726g Lachancea kluyveri SAKL0H00726g N 0.572
ASIM_0001132301 Anisakis simplex ASIM_0001132301 N 0.416
EVEC_0001251901 Enterobius vermicularis EVEC_0001251901 N 0.420
GPLIN_000170600 Globodera pallida GPLIN_000170600 N 0.472
MCOS_0000664501 Mesocestoides corti MCOS_0000664501 N 0.514
K437DRAFT_266676 Tilletiaria anomala K437DRAFT_266676 N 0.503
AACERI_AaceriAGL345W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL345W N 0.451
AGOS_AGL345W Ashbya gossypii AGOS_AGL345W N 0.428
AWRI1499_2837 Brettanomyces bruxellensis AWRI1499_2837 N 0.564
BGIBMGA006156 Bombyx mori BGIBMGA006156 N 0.547
BN7_5943 Wickerhamomyces ciferrii BN7_5943 N 0.531
CC1G_07855 Coprinopsis cinerea CC1G_07855 N 0.431
CMQ_7998 Grosmannia clavigera CMQ_7998 N 0.482
TCF7L2 Tursiops truncatus ENSTTRG00000002360 N 0.444
GLOINDRAFT_9339 Rhizophagus irregularis GLOINDRAFT_9339 N 0.501
HelroG178674 Helobdella robusta HelroG178674 N 0.422
HETIRDRAFT_460226 Heterobasidion irregulare HETIRDRAFT_460226 N 0.486
HPODL_02662 Ogataea parapolymorpha HPODL_02662 N 0.614
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N 0.547
A1Q1_02593 Trichosporon asahii A1Q1_02593 N 0.515
K437DRAFT_66818 Tilletiaria anomala K437DRAFT_66818 N 0.483
KUCA_T00004799001 Kuraishia capsulata KUCA_T00004799001 N 0.579
LALA0_S01e08702g Lachancea lanzarotensis LALA0_S01e08702g N 0.446
LALA0_S10e00254g Lachancea lanzarotensis LALA0_S10e00254g N 0.544
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N 0.527
MAC_03708 Metarhizium acridum MAC_03708 N 0.449
MAJ_01270 Metarhizium majus MAJ_01270 N 0.449
MAM_02299 Metarhizium album MAM_02299 N 0.429
MBR_01289 Metarhizium brunneum MBR_01289 N 0.449
Moror_8439 Moniliophthora roreri Moror_8439 N 0.548
MPER_12197 Moniliophthora perniciosa MPER_12197 N 0.551
MVLG_01553 Microbotryum violaceum MVLG_01553 N 0.571