CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HNAJ_0000974401
(
Hymenolepis nana
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HNAJ_0000974401
T336452_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HNAJ_0000974401-mRNA-1
Sox
10
80
PKSPLSGFACFVQVIRDKHRTLHPDKNIIFSEFSKKCAELWRVMPPNKRAPFDEMSKIDTKRYNREMGEYV
HNAJ_0000974401-mRNA-1
Sox
130
196
PKRALSAFFFFCDQQRPQIRAAHPEWRVSEIAKELGRLWDECSDKAPFERQAQSDKLRYEEQMRQYK
Links
Other
Sox
family TFs
Other
Hymenolepis nana
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMRZ_0001808901
Schistosoma margrebowiei
SMRZ_0001808901
N
0.533
HDID_0000408601
Hymenolepis diminuta
HDID_0000408601
N
0.740
HmN_000466000
Hymenolepis microstoma
HmN_000466000
N
0.479
HmN_000813000
Hymenolepis microstoma
HmN_000813000
N
0.727
HNAJ_0001249801
Hymenolepis nana
HNAJ_0001249801
N
0.479
MCOS_0000526101
Mesocestoides corti
MCOS_0000526101
N
0.522
MCOS_0000726501
Mesocestoides corti
MCOS_0000726501
N
0.616
PXEA_0000566701
Protopolystoma xenopodis
PXEA_0000566701
N
0.487
PXEA_0002175501
Protopolystoma xenopodis
PXEA_0002175501
N
0.486
SCUD_0000020101
Schistosoma curassoni
SCUD_0000020101
N
0.475
SCUD_0000067701
Schistosoma curassoni
SCUD_0000067701
N
0.533
SMRZ_0000146101
Schistosoma margrebowiei
SMRZ_0000146101
N
0.533
HDID_0000237901
Hymenolepis diminuta
HDID_0000237901
N
0.479
SMTD_0001194601
Schistosoma mattheei
SMTD_0001194601
N
0.475
SROB_0000153901
Schistosoma rodhaini
SROB_0000153901
N
0.475
SROB_0001061001
Schistosoma rodhaini
SROB_0001061001
N
0.533
SSLN_0000493501
Schistocephalus solidus
SSLN_0000493501
N
0.470
T265_12733
Opisthorchis viverrini
T265_12733
N
0.450
T265_14643
Opisthorchis viverrini
T265_14643
N
0.570
TRE_0000506801
Trichobilharzia regenti
TRE_0000506801
N
0.513
TsM_000088100
Taenia solium
TsM_000088100
N
0.665
TsM_000115400
Taenia solium
TsM_000115400
N
0.519
TTAC_0000194001
Hydatigera taeniaeformis
TTAC_0000194001
N
0.634
TTAC_0000225801
Hydatigera taeniaeformis
TTAC_0000225801
N
0.499
A_05510
Schistosoma haematobium
A_05510
N
0.533
SMAR013695
Strigamia maritima
SMAR013695
N
0.420
Smp_000980
Schistosoma mansoni
Smp_000980
N
0.475
Smp_103530
Schistosoma mansoni
Smp_103530
N
0.533
SPU_005572
Strongylocentrotus purpuratus
SPU_005572
N
0.433
tetur02g08260
Tetranychus urticae
tetur02g08260
N
0.423
tetur02g08340
Tetranychus urticae
tetur02g08340
N
0.420
fgenesh2_pm.scaffold_24000033
Branchiostoma floridae
fgenesh2_pm.scaffold_24000033
N
0.443
Sakowv30042012m.g
Saccoglossus kowalevskii
Sakowv30042012m.g
N
0.421
Sjc_0031360
Schistosoma japonicum
Sjc_0031360
N
0.455
SMU15016767
Schmidtea mediterranea
SMU15016767
N
0.464
SMU15030256
Schmidtea mediterranea
SMU15030256
N
0.468
ISCW017350
Ixodes scapularis
ISCW017350
N
0.417
csin110255
Clonorchis sinensis
csin110255
N
0.570
D915_00818
Fasciola hepatica
D915_00818
N
0.449
D915_15256
Fasciola hepatica
D915_15256
N
0.570
DILT_0000548601
Diphyllobothrium latum
DILT_0000548601
N
0.616
DILT_0001497901
Diphyllobothrium latum
DILT_0001497901
N
0.470
ECANG7_02036
Echinococcus canadensis
ECANG7_02036
N
0.499
ECANG7_05481
Echinococcus canadensis
ECANG7_05481
N
0.660
EmuJ_000768300
Echinococcus multilocularis
EmuJ_000768300
N
0.660
EmuJ_001049000
Echinococcus multilocularis
EmuJ_001049000
N
0.519
Hba_13817
Heterorhabditis bacteriophora
Hba_13817
N
0.417