Bo4g191280 (Brassica oleracea)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 Bo4g191280 T350732_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42040
M01088_2.00 		Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN		 PBM
Sullivan et al.(2014)
pTH7503 		0.907 0.907
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g191280.1 WRC 155 197

Links

Other WRC family TFs
Other Brassica oleracea TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G42040 Arabidopsis thaliana AT2G42040 D 0.929
Cagra.13389s0020 Capsella grandiflora Cagra.13389s0020 I 0.952
POPTR_0006s20770 Populus trichocarpa POPTR_0006s20770 I 0.814
Bostr.25993s0574 Boechera stricta Bostr.25993s0574 I 0.929
Aquca_014_00855 Aquilegia coerulea Aquca_014_00855 I 0.767
mgf007626m Mimulus guttatus mgf007626m I 0.791
Cucsa.242590 Cucumis sativus Cucsa.242590 I 0.814
cassava36464.valid.m1 Manihot esculenta cassava36464.valid.m1 I 0.814
cassava36463.valid.m1 Manihot esculenta cassava36463.valid.m1 I 0.814
cassava31648.valid.m1 Manihot esculenta cassava31648.valid.m1 I 0.814
29613.m000379 Ricinus communis 29613.m000379 I 0.814
29613.m000377 Ricinus communis 29613.m000377 I 0.814
Pm025936 Prunus mume Pm025936 I 0.814
Ca_07320 Cicer arietinum Ca_07320 I 0.814
VIT_08s0007g06690 Vitis vinifera VIT_08s0007g06690 I 0.767
VIT_08s0007g06640 Vitis vinifera VIT_08s0007g06640 I 0.837
TCM_024932 Theobroma cacao TCM_024932 I 0.814
Solyc10g080530.1 Solanum lycopersicum Solyc10g080530.1 I 0.814
Sb10g006810 Sorghum bicolor Sb10g006810 I 0.786
PRUPE_ppa016277mg Prunus persica PRUPE_ppa016277mg I 0.814
POPTR_0016s05850 Populus trichocarpa POPTR_0016s05850 I 0.814
POPTR_0016s05840 Populus trichocarpa POPTR_0016s05840 I 0.814
POPTR_0006s20790 Populus trichocarpa POPTR_0006s20790 I 0.837
PDK_20s1436981g002 Phoenix dactylifera PDK_20s1436981g002 I 0.814
orange1.1g019760m.g Citrus sinensis orange1.1g019760m.g I 0.814
AMTR_s00024p00159910 Amborella trichopoda AMTR_s00024p00159910 I 0.707
LjT35F01.80.nd Lotus japonicus LjT35F01.80.nd I 0.791
PK26699.1 Cannabis sativa PK26699.1 I 0.814
Thhalv10017052m.g Eutrema salsugineum Thhalv10017052m.g I 0.907
SapurV1A.3188s0010 Salix purpurea SapurV1A.3188s0010 I 0.814
SapurV1A.0854s0100 Salix purpurea SapurV1A.0854s0100 I 0.791
SapurV1A.0854s0090 Salix purpurea SapurV1A.0854s0090 I 0.814
SapurV1A.0251s0230 Salix purpurea SapurV1A.0251s0230 I 0.837
SapurV1A.0251s0220 Salix purpurea SapurV1A.0251s0220 I 0.814
Pavir.J25248 Panicum virgatum Pavir.J25248 I 0.786
Pavir.J23833 Panicum virgatum Pavir.J23833 I 0.786
Carubv10023878m.g Capsella rubella Carubv10023878m.g I 0.952
MDP0000154434 Malus domestica MDP0000154434 I 0.814
MDP0000121493 Malus domestica MDP0000121493 I 0.791
Lus10021062.g Linum usitatissimum Lus10021062.g I 0.762
Lus10004164.g Linum usitatissimum Lus10004164.g I 0.756
Gorai.012G100300 Gossypium raimondii Gorai.012G100300 I 0.814
Gorai.002G156300 Gossypium raimondii Gorai.002G156300 I 0.814
gene00456-v1.0-hybrid Fragaria vesca gene00456-v1.0-hybrid I 0.814
evm.TU.supercontig_85.54 Carica papaya evm.TU.supercontig_85.54 I 0.814
Eucgr.A02456 Eucalyptus grandis Eucgr.A02456 I 0.814
Ciclev10012160m.g Citrus clementina Ciclev10012160m.g I 0.814
GLYMA02G28962 Glycine max GLYMA02G28962 I 0.791
LPERR02G28190 Leersia perrieri LPERR02G28190 I 0.786
GSMUA_Achr9G15730_001 Musa acuminata GSMUA_Achr9G15730_001 I 0.814
GSMUA_Achr7G18600_001 Musa acuminata GSMUA_Achr7G18600_001 I 0.837
GSMUA_Achr3G20210_001 Musa acuminata GSMUA_Achr3G20210_001 I 0.837
GSMUA_Achr3G07730_001 Musa acuminata GSMUA_Achr3G07730_001 I 0.791
GSMUA_Achr10G29530_001 Musa acuminata GSMUA_Achr10G29530_001 I 0.837
GRMZM2G165991 Zea mays GRMZM2G165991 I 0.732
GRMZM2G033915 Zea mays GRMZM2G033915 I 0.780
GLYMA19G33070 Glycine max GLYMA19G33070 I 0.814
GLYMA09G16841 Glycine max GLYMA09G16841 I 0.814
GLYMA03G30170 Glycine max GLYMA03G30170 I 0.814
LPERR06G06210 Leersia perrieri LPERR06G06210 I 0.762
fgenesh2_kg.4__2350__AT2G42040.1 Arabidopsis lyrata fgenesh2_kg.4__2350__AT2G42040.1 I 0.929
F775_01928 Aegilops tauschii F775_01928 I 0.750
BRADI1G46270 Brachypodium distachyon BRADI1G46270 I 0.810
Bra016897 Brassica rapa Bra016897 I 0.977
Bra004667 Brassica rapa Bra004667 I 0.884
Bra000251 Brassica rapa Bra000251 I 0.930
Bo4g014690 Brassica oleracea Bo4g014690 I 0.907
Bo3g035920 Brassica oleracea Bo3g035920 I 0.930
BGIOSGA022518 Oryza indica BGIOSGA022518 I 0.762
BGIOSGA005516 Oryza indica BGIOSGA005516 I 0.786
OMERI06G07980 Oryza meridionalis OMERI06G07980 I 0.756
OS06G0207600 Oryza sativa OS06G0207600 I 0.762
OS02G0773600 Oryza sativa OS02G0773600 I 0.786
ORUFI06G07050 Oryza rufipogon ORUFI06G07050 I 0.762
ORUFI02G35820 Oryza rufipogon ORUFI02G35820 I 0.786
ORGLA06G0063300 Oryza glaberrima ORGLA06G0063300 I 0.762
ORGLA02G0296600 Oryza glaberrima ORGLA02G0296600 I 0.786
OPUNC06G06450 Oryza punctata OPUNC06G06450 I 0.780
OPUNC02G31650 Oryza punctata OPUNC02G31650 I 0.786
ONIVA06G08110 Oryza nivara ONIVA06G08110 I 0.762
ONIVA02G36360 Oryza nivara ONIVA02G36360 I 0.786
PGSC0003DMG400023669 Solanum tuberosum PGSC0003DMG400023669 I 0.814
OMERI02G32570 Oryza meridionalis OMERI02G32570 I 0.786
OGLUM06G07170 Oryza glumaepatula OGLUM06G07170 I 0.762
OGLUM02G35430 Oryza glumaepatula OGLUM02G35430 I 0.786
OBART06G06800 Oryza barthii OBART06G06800 I 0.786
OB06G16230 Oryza brachyantha OB06G16230 I 0.762
OB02G41140 Oryza brachyantha OB02G41140 I 0.708
MTR_7g093360 Medicago truncatula MTR_7g093360 I 0.814
MTR_7g093350 Medicago truncatula MTR_7g093350 I 0.814
MTR_1g054175 Medicago truncatula MTR_1g054175 I 0.814
MLOC_17575 Hordeum vulgare MLOC_17575 I 0.767