CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G165991
(
Zea mays
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
GRMZM2G165991
T350880_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42040
M01088_2.00
Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN
PBM
Sullivan et al.(2014)
pTH7503
0.732
0.732
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G165991_P01
WRC
188
228
MEGSRCSRKNGRGWRCSQPTLVGYALCQYHLGKGRMRSGSA
GRMZM2G165991_P03
WRC
86
126
MEGSRCSRKNGRGWRCSQPTLVGYALCQYHLGKGRMRSGSA
Links
Other
WRC
family TFs
Other
Zea mays
TFs
90 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT2G42040
Arabidopsis thaliana
AT2G42040
D
0.732
Carubv10023878m.g
Capsella rubella
Carubv10023878m.g
I
0.732
OS06G0207600
Oryza sativa
OS06G0207600
I
0.833
Cagra.13389s0020
Capsella grandiflora
Cagra.13389s0020
I
0.732
Bostr.25993s0574
Boechera stricta
Bostr.25993s0574
I
0.707
mgf007626m
Mimulus guttatus
mgf007626m
I
0.780
Cucsa.242590
Cucumis sativus
Cucsa.242590
I
0.756
cassava36464.valid.m1
Manihot esculenta
cassava36464.valid.m1
I
0.756
cassava36463.valid.m1
Manihot esculenta
cassava36463.valid.m1
I
0.756
cassava31648.valid.m1
Manihot esculenta
cassava31648.valid.m1
I
0.756
29613.m000379
Ricinus communis
29613.m000379
I
0.756
29613.m000377
Ricinus communis
29613.m000377
I
0.756
Pm025936
Prunus mume
Pm025936
I
0.756
Ca_07320
Cicer arietinum
Ca_07320
I
0.756
VIT_08s0007g06640
Vitis vinifera
VIT_08s0007g06640
I
0.780
TCM_024932
Theobroma cacao
TCM_024932
I
0.756
Solyc10g080530.1
Solanum lycopersicum
Solyc10g080530.1
I
0.732
Sb10g006810
Sorghum bicolor
Sb10g006810
I
0.829
PRUPE_ppa016277mg
Prunus persica
PRUPE_ppa016277mg
I
0.756
POPTR_0016s05840
Populus trichocarpa
POPTR_0016s05840
I
0.721
POPTR_0006s20790
Populus trichocarpa
POPTR_0006s20790
I
0.780
PGSC0003DMG400023669
Solanum tuberosum
PGSC0003DMG400023669
I
0.732
PDK_20s1436981g002
Phoenix dactylifera
PDK_20s1436981g002
I
0.780
orange1.1g019760m.g
Citrus sinensis
orange1.1g019760m.g
I
0.721
AMTR_s00024p00159910
Amborella trichopoda
AMTR_s00024p00159910
I
0.707
LjT35F01.80.nd
Lotus japonicus
LjT35F01.80.nd
I
0.780
PK26699.1
Cannabis sativa
PK26699.1
I
0.732
Thhalv10017052m.g
Eutrema salsugineum
Thhalv10017052m.g
I
0.732
SapurV1A.3188s0010
Salix purpurea
SapurV1A.3188s0010
I
0.756
SapurV1A.0854s0090
Salix purpurea
SapurV1A.0854s0090
I
0.721
SapurV1A.0251s0230
Salix purpurea
SapurV1A.0251s0230
I
0.780
SapurV1A.0251s0220
Salix purpurea
SapurV1A.0251s0220
I
0.756
Pavir.J25248
Panicum virgatum
Pavir.J25248
I
0.829
Pavir.J23833
Panicum virgatum
Pavir.J23833
I
0.829
Ciclev10012160m.g
Citrus clementina
Ciclev10012160m.g
I
0.721
MDP0000154434
Malus domestica
MDP0000154434
I
0.721
MDP0000121493
Malus domestica
MDP0000121493
I
0.721
Lus10021062.g
Linum usitatissimum
Lus10021062.g
I
0.756
Lus10004164.g
Linum usitatissimum
Lus10004164.g
I
0.756
Gorai.012G100300
Gossypium raimondii
Gorai.012G100300
I
0.756
Gorai.002G156300
Gossypium raimondii
Gorai.002G156300
I
0.756
gene00456-v1.0-hybrid
Fragaria vesca
gene00456-v1.0-hybrid
I
0.756
evm.TU.supercontig_85.54
Carica papaya
evm.TU.supercontig_85.54
I
0.756
Eucgr.A02456
Eucalyptus grandis
Eucgr.A02456
I
0.756
GLYMA03G30170
Glycine max
GLYMA03G30170
I
0.756
LPERR02G28190
Leersia perrieri
LPERR02G28190
I
0.854
OS02G0773600
Oryza sativa
OS02G0773600
I
0.829
GSMUA_Achr7G18600_001
Musa acuminata
GSMUA_Achr7G18600_001
I
0.780
GSMUA_Achr3G20210_001
Musa acuminata
GSMUA_Achr3G20210_001
I
0.721
GSMUA_Achr3G07730_001
Musa acuminata
GSMUA_Achr3G07730_001
I
0.756
GSMUA_Achr10G29530_001
Musa acuminata
GSMUA_Achr10G29530_001
I
0.780
GRMZM2G033915
Zea mays
GRMZM2G033915
I
0.756
GLYMA19G33070
Glycine max
GLYMA19G33070
I
0.756
GLYMA09G16841
Glycine max
GLYMA09G16841
I
0.756
GSMUA_Achr9G15730_001
Musa acuminata
GSMUA_Achr9G15730_001
I
0.756
GLYMA02G28962
Glycine max
GLYMA02G28962
I
0.721
fgenesh2_kg.4__2350__AT2G42040.1
Arabidopsis lyrata
fgenesh2_kg.4__2350__AT2G42040.1
I
0.732
F775_01928
Aegilops tauschii
F775_01928
I
0.875
BRADI1G46270
Brachypodium distachyon
BRADI1G46270
I
0.829
Bra016897
Brassica rapa
Bra016897
I
0.707
Bra000251
Brassica rapa
Bra000251
I
0.707
Bo4g191280
Brassica oleracea
Bo4g191280
I
0.732
Bo3g035920
Brassica oleracea
Bo3g035920
I
0.707
BGIOSGA022518
Oryza indica
BGIOSGA022518
I
0.833
BGIOSGA005516
Oryza indica
BGIOSGA005516
I
0.829
MLOC_17575
Hordeum vulgare
MLOC_17575
I
0.767
ORUFI06G07050
Oryza rufipogon
ORUFI06G07050
I
0.833
ORUFI02G35820
Oryza rufipogon
ORUFI02G35820
I
0.829
ORGLA06G0063300
Oryza glaberrima
ORGLA06G0063300
I
0.833
ORGLA02G0296600
Oryza glaberrima
ORGLA02G0296600
I
0.829
OPUNC06G06450
Oryza punctata
OPUNC06G06450
I
0.854
OPUNC02G31650
Oryza punctata
OPUNC02G31650
I
0.829
ONIVA06G08110
Oryza nivara
ONIVA06G08110
I
0.833
ONIVA02G36360
Oryza nivara
ONIVA02G36360
I
0.829
OMERI06G07980
Oryza meridionalis
OMERI06G07980
I
0.829
OMERI02G32570
Oryza meridionalis
OMERI02G32570
I
0.829
OGLUM06G07170
Oryza glumaepatula
OGLUM06G07170
I
0.833
OGLUM02G35430
Oryza glumaepatula
OGLUM02G35430
I
0.829
OBART06G06800
Oryza barthii
OBART06G06800
I
0.829
OB06G16230
Oryza brachyantha
OB06G16230
I
0.854
MTR_7g093360
Medicago truncatula
MTR_7g093360
I
0.756
MTR_7g093350
Medicago truncatula
MTR_7g093350
I
0.756
MTR_1g054175
Medicago truncatula
MTR_1g054175
I
0.756
LPERR06G06210
Leersia perrieri
LPERR06G06210
I
0.829
Pavir.Aa00328
Panicum virgatum
Pavir.Aa00328
N
0.902
Pavir.J07916
Panicum virgatum
Pavir.J07916
N
0.902
GRMZM2G134552
Zea mays
GRMZM2G134552
N
0.951
Si019733m.g
Setaria italica
Si019733m.g
N
0.902
Sb04g034665
Sorghum bicolor
Sb04g034665
N
0.878