OB06G16230 (Oryza brachyantha)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 OB06G16230 T350988_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42040
M01088_2.00 		Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN		 PBM
Sullivan et al.(2014)
pTH7503 		0.786 0.786
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB06G16230.1 WRC 194 235

Links

Other WRC family TFs
Other Oryza brachyantha TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G42040 Arabidopsis thaliana AT2G42040 D 0.786
Cagra.13389s0020 Capsella grandiflora Cagra.13389s0020 I 0.786
POPTR_0006s20770 Populus trichocarpa POPTR_0006s20770 I 0.767
Bostr.25993s0574 Boechera stricta Bostr.25993s0574 I 0.762
Aquca_014_00855 Aquilegia coerulea Aquca_014_00855 I 0.767
mgf007626m Mimulus guttatus mgf007626m I 0.744
Cucsa.242590 Cucumis sativus Cucsa.242590 I 0.810
cassava36464.valid.m1 Manihot esculenta cassava36464.valid.m1 I 0.814
cassava36463.valid.m1 Manihot esculenta cassava36463.valid.m1 I 0.814
cassava31648.valid.m1 Manihot esculenta cassava31648.valid.m1 I 0.814
29613.m000379 Ricinus communis 29613.m000379 I 0.814
29613.m000377 Ricinus communis 29613.m000377 I 0.814
Pm025936 Prunus mume Pm025936 I 0.814
Ca_07320 Cicer arietinum Ca_07320 I 0.814
VIT_08s0007g06690 Vitis vinifera VIT_08s0007g06690 I 0.767
VIT_08s0007g06640 Vitis vinifera VIT_08s0007g06640 I 0.791
TCM_024932 Theobroma cacao TCM_024932 I 0.814
Solyc10g080530.1 Solanum lycopersicum Solyc10g080530.1 I 0.786
Sb10g006810 Sorghum bicolor Sb10g006810 I 0.881
PRUPE_ppa016277mg Prunus persica PRUPE_ppa016277mg I 0.814
POPTR_0016s05850 Populus trichocarpa POPTR_0016s05850 I 0.767
POPTR_0016s05840 Populus trichocarpa POPTR_0016s05840 I 0.791
POPTR_0006s20790 Populus trichocarpa POPTR_0006s20790 I 0.791
PDK_20s1436981g002 Phoenix dactylifera PDK_20s1436981g002 I 0.791
orange1.1g019760m.g Citrus sinensis orange1.1g019760m.g I 0.791
AMTR_s00024p00159910 Amborella trichopoda AMTR_s00024p00159910 I 0.762
LjT35F01.80.nd Lotus japonicus LjT35F01.80.nd I 0.814
PK26699.1 Cannabis sativa PK26699.1 I 0.810
Thhalv10017052m.g Eutrema salsugineum Thhalv10017052m.g I 0.767
SapurV1A.3188s0010 Salix purpurea SapurV1A.3188s0010 I 0.767
SapurV1A.0854s0100 Salix purpurea SapurV1A.0854s0100 I 0.767
SapurV1A.0854s0090 Salix purpurea SapurV1A.0854s0090 I 0.791
SapurV1A.0251s0230 Salix purpurea SapurV1A.0251s0230 I 0.810
SapurV1A.0251s0220 Salix purpurea SapurV1A.0251s0220 I 0.767
Pavir.J25248 Panicum virgatum Pavir.J25248 I 0.881
Pavir.J23833 Panicum virgatum Pavir.J23833 I 0.881
Carubv10023878m.g Capsella rubella Carubv10023878m.g I 0.786
MDP0000154434 Malus domestica MDP0000154434 I 0.791
MDP0000121493 Malus domestica MDP0000121493 I 0.791
Lus10021062.g Linum usitatissimum Lus10021062.g I 0.786
Lus10004164.g Linum usitatissimum Lus10004164.g I 0.805
Gorai.012G100300 Gossypium raimondii Gorai.012G100300 I 0.814
Gorai.002G156300 Gossypium raimondii Gorai.002G156300 I 0.814
gene00456-v1.0-hybrid Fragaria vesca gene00456-v1.0-hybrid I 0.791
evm.TU.supercontig_85.54 Carica papaya evm.TU.supercontig_85.54 I 0.814
Eucgr.A02456 Eucalyptus grandis Eucgr.A02456 I 0.814
Ciclev10012160m.g Citrus clementina Ciclev10012160m.g I 0.791
fgenesh2_kg.4__2350__AT2G42040.1 Arabidopsis lyrata fgenesh2_kg.4__2350__AT2G42040.1 I 0.786
PGSC0003DMG400023669 Solanum tuberosum PGSC0003DMG400023669 I 0.786
GSMUA_Achr7G18600_001 Musa acuminata GSMUA_Achr7G18600_001 I 0.791
GSMUA_Achr3G20210_001 Musa acuminata GSMUA_Achr3G20210_001 I 0.791
GSMUA_Achr3G07730_001 Musa acuminata GSMUA_Achr3G07730_001 I 0.810
GSMUA_Achr10G29530_001 Musa acuminata GSMUA_Achr10G29530_001 I 0.791
GRMZM2G165991 Zea mays GRMZM2G165991 I 0.854
GRMZM2G033915 Zea mays GRMZM2G033915 I 0.854
GLYMA19G33070 Glycine max GLYMA19G33070 I 0.814
GLYMA09G16841 Glycine max GLYMA09G16841 I 0.814
GLYMA03G30170 Glycine max GLYMA03G30170 I 0.814
GLYMA02G28962 Glycine max GLYMA02G28962 I 0.814
GSMUA_Achr9G15730_001 Musa acuminata GSMUA_Achr9G15730_001 I 0.814
F775_01928 Aegilops tauschii F775_01928 I 0.917
BRADI1G46270 Brachypodium distachyon BRADI1G46270 I 0.857
Bra016897 Brassica rapa Bra016897 I 0.744
Bra004667 Brassica rapa Bra004667 I 0.738
Bra000251 Brassica rapa Bra000251 I 0.744
Bo4g191280 Brassica oleracea Bo4g191280 I 0.762
Bo4g014690 Brassica oleracea Bo4g014690 I 0.744
Bo3g035920 Brassica oleracea Bo3g035920 I 0.744
BGIOSGA022518 Oryza indica BGIOSGA022518 I 0.976
BGIOSGA005516 Oryza indica BGIOSGA005516 I 0.952
LPERR06G06210 Leersia perrieri LPERR06G06210 I 0.952
OS06G0207600 Oryza sativa OS06G0207600 I 0.976
OS02G0773600 Oryza sativa OS02G0773600 I 0.952
ORUFI06G07050 Oryza rufipogon ORUFI06G07050 I 0.976
ORUFI02G35820 Oryza rufipogon ORUFI02G35820 I 0.952
ORGLA06G0063300 Oryza glaberrima ORGLA06G0063300 I 0.976
ORGLA02G0296600 Oryza glaberrima ORGLA02G0296600 I 0.952
OPUNC06G06450 Oryza punctata OPUNC06G06450 I 0.976
OPUNC02G31650 Oryza punctata OPUNC02G31650 I 0.952
ONIVA06G08110 Oryza nivara ONIVA06G08110 I 0.976
ONIVA02G36360 Oryza nivara ONIVA02G36360 I 0.952
OMERI06G07980 Oryza meridionalis OMERI06G07980 I 0.976
OMERI02G32570 Oryza meridionalis OMERI02G32570 I 0.952
OGLUM06G07170 Oryza glumaepatula OGLUM06G07170 I 0.976
OGLUM02G35430 Oryza glumaepatula OGLUM02G35430 I 0.952
OBART06G06800 Oryza barthii OBART06G06800 I 0.952
MTR_7g093360 Medicago truncatula MTR_7g093360 I 0.814
MTR_7g093350 Medicago truncatula MTR_7g093350 I 0.814
MTR_1g054175 Medicago truncatula MTR_1g054175 I 0.814
MLOC_17575 Hordeum vulgare MLOC_17575 I 0.814
LPERR02G28190 Leersia perrieri LPERR02G28190 I 0.905
Pavir.Aa00328 Panicum virgatum Pavir.Aa00328 N 0.810
Pavir.J07916 Panicum virgatum Pavir.J07916 N 0.810
GRMZM2G134552 Zea mays GRMZM2G134552 N 0.786
Si019733m.g Setaria italica Si019733m.g N 0.810
Sb04g034665 Sorghum bicolor Sb04g034665 N 0.714