PGSC0003DMG400023669 (Solanum tuberosum)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 PGSC0003DMG400023669 T351178_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42040
M01088_2.00 		Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN		 PBM
Sullivan et al.(2014)
pTH7503 		0.884 0.884
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400060846 WRC 199 241
PGSC0003DMT400060847 WRC 48 90

Links

Other WRC family TFs
Other Solanum tuberosum TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G42040 Arabidopsis thaliana AT2G42040 D 0.905
Cagra.13389s0020 Capsella grandiflora Cagra.13389s0020 I 0.881
POPTR_0006s20770 Populus trichocarpa POPTR_0006s20770 I 0.953
Bostr.25993s0574 Boechera stricta Bostr.25993s0574 I 0.881
Aquca_014_00855 Aquilegia coerulea Aquca_014_00855 I 0.814
mgf007626m Mimulus guttatus mgf007626m I 0.767
Cucsa.242590 Cucumis sativus Cucsa.242590 I 0.907
cassava36464.valid.m1 Manihot esculenta cassava36464.valid.m1 I 0.907
cassava36463.valid.m1 Manihot esculenta cassava36463.valid.m1 I 0.907
cassava31648.valid.m1 Manihot esculenta cassava31648.valid.m1 I 0.907
29613.m000379 Ricinus communis 29613.m000379 I 0.907
29613.m000377 Ricinus communis 29613.m000377 I 0.884
Pm025936 Prunus mume Pm025936 I 0.907
Ca_07320 Cicer arietinum Ca_07320 I 0.907
VIT_08s0007g06690 Vitis vinifera VIT_08s0007g06690 I 0.884
VIT_08s0007g06640 Vitis vinifera VIT_08s0007g06640 I 0.907
TCM_024932 Theobroma cacao TCM_024932 I 0.907
Solyc10g080530.1 Solanum lycopersicum Solyc10g080530.1 I 1.000
Sb10g006810 Sorghum bicolor Sb10g006810 I 0.833
PRUPE_ppa016277mg Prunus persica PRUPE_ppa016277mg I 0.907
POPTR_0016s05850 Populus trichocarpa POPTR_0016s05850 I 0.953
POPTR_0016s05840 Populus trichocarpa POPTR_0016s05840 I 0.930
POPTR_0006s20790 Populus trichocarpa POPTR_0006s20790 I 0.907
PDK_20s1436981g002 Phoenix dactylifera PDK_20s1436981g002 I 0.884
orange1.1g019760m.g Citrus sinensis orange1.1g019760m.g I 0.930
AMTR_s00024p00159910 Amborella trichopoda AMTR_s00024p00159910 I 0.756
LjT35F01.80.nd Lotus japonicus LjT35F01.80.nd I 0.884
PK26699.1 Cannabis sativa PK26699.1 I 0.907
Thhalv10017052m.g Eutrema salsugineum Thhalv10017052m.g I 0.884
SapurV1A.3188s0010 Salix purpurea SapurV1A.3188s0010 I 0.907
SapurV1A.0854s0100 Salix purpurea SapurV1A.0854s0100 I 0.907
SapurV1A.0854s0090 Salix purpurea SapurV1A.0854s0090 I 0.930
SapurV1A.0251s0230 Salix purpurea SapurV1A.0251s0230 I 0.884
SapurV1A.0251s0220 Salix purpurea SapurV1A.0251s0220 I 0.907
Pavir.J25248 Panicum virgatum Pavir.J25248 I 0.833
Pavir.J23833 Panicum virgatum Pavir.J23833 I 0.833
Carubv10023878m.g Capsella rubella Carubv10023878m.g I 0.881
MDP0000154434 Malus domestica MDP0000154434 I 0.930
MDP0000121493 Malus domestica MDP0000121493 I 0.907
Lus10021062.g Linum usitatissimum Lus10021062.g I 0.714
Lus10004164.g Linum usitatissimum Lus10004164.g I 0.732
Gorai.012G100300 Gossypium raimondii Gorai.012G100300 I 0.907
Gorai.002G156300 Gossypium raimondii Gorai.002G156300 I 0.884
gene00456-v1.0-hybrid Fragaria vesca gene00456-v1.0-hybrid I 0.907
evm.TU.supercontig_85.54 Carica papaya evm.TU.supercontig_85.54 I 0.907
Eucgr.A02456 Eucalyptus grandis Eucgr.A02456 I 0.907
Ciclev10012160m.g Citrus clementina Ciclev10012160m.g I 0.930
fgenesh2_kg.4__2350__AT2G42040.1 Arabidopsis lyrata fgenesh2_kg.4__2350__AT2G42040.1 I 0.905
GSMUA_Achr7G18600_001 Musa acuminata GSMUA_Achr7G18600_001 I 0.907
GSMUA_Achr3G20210_001 Musa acuminata GSMUA_Achr3G20210_001 I 0.884
GSMUA_Achr3G07730_001 Musa acuminata GSMUA_Achr3G07730_001 I 0.884
GSMUA_Achr10G29530_001 Musa acuminata GSMUA_Achr10G29530_001 I 0.907
GRMZM2G165991 Zea mays GRMZM2G165991 I 0.732
GRMZM2G033915 Zea mays GRMZM2G033915 I 0.829
GLYMA19G33070 Glycine max GLYMA19G33070 I 0.907
GLYMA09G16841 Glycine max GLYMA09G16841 I 0.907
GLYMA03G30170 Glycine max GLYMA03G30170 I 0.907
GLYMA02G28962 Glycine max GLYMA02G28962 I 0.884
GSMUA_Achr9G15730_001 Musa acuminata GSMUA_Achr9G15730_001 I 0.907
F775_01928 Aegilops tauschii F775_01928 I 0.792
BRADI1G46270 Brachypodium distachyon BRADI1G46270 I 0.814
Bra016897 Brassica rapa Bra016897 I 0.837
Bra004667 Brassica rapa Bra004667 I 0.814
Bra000251 Brassica rapa Bra000251 I 0.860
Bo4g191280 Brassica oleracea Bo4g191280 I 0.814
Bo4g014690 Brassica oleracea Bo4g014690 I 0.837
Bo3g035920 Brassica oleracea Bo3g035920 I 0.860
BGIOSGA022518 Oryza indica BGIOSGA022518 I 0.786
BGIOSGA005516 Oryza indica BGIOSGA005516 I 0.810
LPERR06G06210 Leersia perrieri LPERR06G06210 I 0.786
OS06G0207600 Oryza sativa OS06G0207600 I 0.786
OS02G0773600 Oryza sativa OS02G0773600 I 0.810
ORUFI06G07050 Oryza rufipogon ORUFI06G07050 I 0.786
ORUFI02G35820 Oryza rufipogon ORUFI02G35820 I 0.810
ORGLA06G0063300 Oryza glaberrima ORGLA06G0063300 I 0.786
ORGLA02G0296600 Oryza glaberrima ORGLA02G0296600 I 0.810
OPUNC06G06450 Oryza punctata OPUNC06G06450 I 0.805
OPUNC02G31650 Oryza punctata OPUNC02G31650 I 0.810
ONIVA06G08110 Oryza nivara ONIVA06G08110 I 0.786
ONIVA02G36360 Oryza nivara ONIVA02G36360 I 0.810
OMERI06G07980 Oryza meridionalis OMERI06G07980 I 0.780
OMERI02G32570 Oryza meridionalis OMERI02G32570 I 0.810
OGLUM06G07170 Oryza glumaepatula OGLUM06G07170 I 0.786
OGLUM02G35430 Oryza glumaepatula OGLUM02G35430 I 0.810
OBART06G06800 Oryza barthii OBART06G06800 I 0.810
OB06G16230 Oryza brachyantha OB06G16230 I 0.786
MTR_7g093360 Medicago truncatula MTR_7g093360 I 0.907
MTR_7g093350 Medicago truncatula MTR_7g093350 I 0.907
MTR_1g054175 Medicago truncatula MTR_1g054175 I 0.907
MLOC_17575 Hordeum vulgare MLOC_17575 I 0.791
LPERR02G28190 Leersia perrieri LPERR02G28190 I 0.810
Pavir.Aa00328 Panicum virgatum Pavir.Aa00328 N 0.714
Pavir.J07916 Panicum virgatum Pavir.J07916 N 0.714
Si019733m.g Setaria italica Si019733m.g N 0.714