CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_01884
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_01884
T357953_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_01884T0
Zinc cluster
72
110
NACTECRKKRAKCDGRKPCSRCQGQKDIECVYEIPVRQS
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
0.000
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
0.000
BPC2
Arabidopsis lyrata
fgenesh2_kg.1__1602__AT1G14685.1
I
0.000
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.000
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.000
BPC2
Arabidopsis thaliana
AT1G14685
N
0.000
Bo5g019930
Brassica oleracea
Bo5g019930
N
0.000
Bo8g066170
Brassica oleracea
Bo8g066170
N
0.000
Bo8g106640
Brassica oleracea
Bo8g106640
N
0.000
Bra016686
Brassica rapa
Bra016686
N
0.000
Bra026196
Brassica rapa
Bra026196
N
0.000
Bra026813
Brassica rapa
Bra026813
N
0.000
Bostr.0124s0194
Boechera stricta
Bostr.0124s0194
N
0.000
Cagra.3501s0027
Capsella grandiflora
Cagra.3501s0027
N
0.000
Carubv10009978m.g
Capsella rubella
Carubv10009978m.g
N
0.000
Thhalv10008428m.g
Eutrema salsugineum
Thhalv10008428m.g
N
0.000