CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DEHA2E10120g
(
Debaryomyces hansenii
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
DEHA2E10120g
T366266_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LEU3
M01590_2.00
Saccharomyces cerevisiae
NNCGGNNNN
NNNNCCGNN
PBM
Zhu et al.(2009)
Leu3
0.560
0.650
LEU3
M07526_2.00
Saccharomyces cerevisiae
CCKDHDSCGS
SCGSHDHMGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0324.1
0.560
0.650
LEU3
M08684_2.00
Saccharomyces cerevisiae
SCKNNNNMGS
SCKNNNNMGS
Misc
DeBoer et al.(2011)
YLR451W_781
0.560
0.650
LEU3
M11482_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$LEU3_B
0.560
0.650
LEU3
M11483_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$LEU3_Q6
0.560
0.650
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAR65800
Zinc cluster
62
104
MACVECRQQKSRCDAHEKHPAPCSRCAKKGLQCNLKSDYKRTY
Links
Other
Zinc cluster
family TFs
Other
Debaryomyces hansenii
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA05G0036200
Oryza glaberrima
ORGLA05G0036200
N
Thhalv10005181m.g
Eutrema salsugineum
Thhalv10005181m.g
N
Pavir.J31164
Panicum virgatum
Pavir.J31164
N
Carubv10003065m.g
Capsella rubella
Carubv10003065m.g
N
Cagra.0418s0011
Capsella grandiflora
Cagra.0418s0011
N
Bostr.29827s0125
Boechera stricta
Bostr.29827s0125
N
Si011269m.g
Setaria italica
Si011269m.g
N
Sb09g004315
Sorghum bicolor
Sb09g004315
N
OS05G0155400
Oryza sativa
OS05G0155400
N
AC194965.4_FG004
Zea mays
AC194965.4_FG004
N
OPUNC05G03600
Oryza punctata
OPUNC05G03600
N
OLONG_020882
Oryza longistaminata
OLONG_020882
N
OBART05G03900
Oryza barthii
OBART05G03900
N
OB05G13650
Oryza brachyantha
OB05G13650
N
BRADI2G12590
Brachypodium distachyon
BRADI2G12590
N
BGIOSGA018779
Oryza indica
BGIOSGA018779
N
GATA23
Arabidopsis thaliana
AT5G26930
N
GATA23
Arabidopsis lyrata
Al_scaffold_0006_2616
N