CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.5.1119.1
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
e_gw1.5.1119.1
T389475_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.5.1119.1
Zinc cluster
16
52
TGCRTCRSRHAKCDEAQPECGTCRRLGLTCGGYGARL
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZFP5
Arabidopsis thaliana
AT1G10480
D
Carubv10002570m.g
Capsella rubella
Carubv10002570m.g
I
Si031489m.g
Setaria italica
Si031489m.g
I
Cagra.3166s0007
Capsella grandiflora
Cagra.3166s0007
I
Cagra.1504s0017
Capsella grandiflora
Cagra.1504s0017
I
Bostr.2902s0137
Boechera stricta
Bostr.2902s0137
I
Bostr.13671s0437
Boechera stricta
Bostr.13671s0437
I
Bostr.13129s0308
Boechera stricta
Bostr.13129s0308
I
cassava45710.m1
Manihot esculenta
cassava45710.m1
I
cassava44297.m1
Manihot esculenta
cassava44297.m1
I
30045.m000471
Ricinus communis
30045.m000471
I
Pm008291
Prunus mume
Pm008291
I
Ca_08116
Cicer arietinum
Ca_08116
I
VIT_08s0040g00750
Vitis vinifera
VIT_08s0040g00750
I
TRIUR3_34498
Triticum urartu
TRIUR3_34498
I
TRIUR3_22340
Triticum urartu
TRIUR3_22340
I
Traes_5DL_DD8A0F6BE
Triticum aestivum
Traes_5DL_DD8A0F6BE
I
Traes_5DL_B97546DA11
Triticum aestivum
Traes_5DL_B97546DA11
I
Traes_5BL_3E6B0CD61
Triticum aestivum
Traes_5BL_3E6B0CD61
I
Traes_5AL_81EFE5211
Triticum aestivum
Traes_5AL_81EFE5211
I
TCM_044725
Theobroma cacao
TCM_044725
I
Solyc10g078990.1
Solanum lycopersicum
Solyc10g078990.1
I
Solyc10g078970.1
Solanum lycopersicum
Solyc10g078970.1
I
Si037914m.g
Setaria italica
Si037914m.g
I
chr5.LjT04G07.90.nd
Lotus japonicus
chr5.LjT04G07.90.nd
I
Pavir.Bb02239
Panicum virgatum
Pavir.Bb02239
I
AMTR_s00022p00165560
Amborella trichopoda
AMTR_s00022p00165560
I
PK10012.1
Cannabis sativa
PK10012.1
I
Thhalv10015891m.g
Eutrema salsugineum
Thhalv10015891m.g
I
Thhalv10008773m.g
Eutrema salsugineum
Thhalv10008773m.g
I
Pavir.J36164
Panicum virgatum
Pavir.J36164
I
Pavir.Ib01877
Panicum virgatum
Pavir.Ib01877
I
Pavir.Ib01803
Panicum virgatum
Pavir.Ib01803
I
Pavir.Ib01788
Panicum virgatum
Pavir.Ib01788
I
Pavir.Ia03263
Panicum virgatum
Pavir.Ia03263
I
Pavir.Ia03096
Panicum virgatum
Pavir.Ia03096
I
Pavir.Ha01090
Panicum virgatum
Pavir.Ha01090
I
Carubv10003685m.g
Capsella rubella
Carubv10003685m.g
I
orange1.1g046965m.g
Citrus sinensis
orange1.1g046965m.g
I
MDP0000165710
Malus domestica
MDP0000165710
I
MDP0000121370
Malus domestica
MDP0000121370
I
Lus10017229.g
Linum usitatissimum
Lus10017229.g
I
gene05263-v1.0-hybrid
Fragaria vesca
gene05263-v1.0-hybrid
I
gene05169-v1.0-hybrid
Fragaria vesca
gene05169-v1.0-hybrid
I
evm.TU.supercontig_1307.1
Carica papaya
evm.TU.supercontig_1307.1
I
evm.TU.supercontig_116.88
Carica papaya
evm.TU.supercontig_116.88
I
Ciclev10003844m.g
Citrus clementina
Ciclev10003844m.g
I
Carubv10018785m.g
Capsella rubella
Carubv10018785m.g
I
Carubv10003820m.g
Capsella rubella
Carubv10003820m.g
I
F775_42450
Aegilops tauschii
F775_42450
I
LPERR08G07840
Leersia perrieri
LPERR08G07840
I
Si028367m.g
Setaria italica
Si028367m.g
I
GRMZM2G403590
Zea mays
GRMZM2G403590
I
GRMZM2G161255
Zea mays
GRMZM2G161255
I
GRMZM2G115388
Zea mays
GRMZM2G115388
I
GRMZM2G108818
Zea mays
GRMZM2G108818
I
GRMZM2G037574
Zea mays
GRMZM2G037574
I
GLYMA19G40220
Glycine max
GLYMA19G40220
I
GLYMA06G14783
Glycine max
GLYMA06G14783
I
GLYMA03G37610
Glycine max
GLYMA03G37610
I
GIS2
Arabidopsis lyrata
fgenesh2_kg.6__609__AT5G06650.1
I
GRMZM2G703281
Zea mays
GRMZM2G703281
I
F775_01070
Aegilops tauschii
F775_01070
I
BRADI4G37760
Brachypodium distachyon
BRADI4G37760
I
BRADI4G30920
Brachypodium distachyon
BRADI4G30920
I
Bra028724
Brassica rapa
Bra028724
I
Bra008787
Brassica rapa
Bra008787
I
Bo9g166240
Brassica oleracea
Bo9g166240
I
Bo9g011450
Brassica oleracea
Bo9g011450
I
Bo8g109510
Brassica oleracea
Bo8g109510
I
Bo2g007320
Brassica oleracea
Bo2g007320
I
BGIOSGA029710
Oryza indica
BGIOSGA029710
I
GIS2
Arabidopsis thaliana
AT5G06650
I
OPUNC09G09720
Oryza punctata
OPUNC09G09720
I
SELMODRAFT_450839
Selaginella moellendorffii
SELMODRAFT_450839
I
SELMODRAFT_450832
Selaginella moellendorffii
SELMODRAFT_450832
I
SELMODRAFT_450813
Selaginella moellendorffii
SELMODRAFT_450813
I
SELMODRAFT_405785
Selaginella moellendorffii
SELMODRAFT_405785
I
Sb02g025390
Sorghum bicolor
Sb02g025390
I
Sb01g034110
Sorghum bicolor
Sb01g034110
I
PGSC0003DMG400011450
Solanum tuberosum
PGSC0003DMG400011450
I
OS09G0431900
Oryza sativa
OS09G0431900
I
ORUFI09G12050
Oryza rufipogon
ORUFI09G12050
I
ORGLA09G0084000
Oryza glaberrima
ORGLA09G0084000
I
LPERR09G07930
Leersia perrieri
LPERR09G07930
I
ONIVA09G10990
Oryza nivara
ONIVA09G10990
I
OMERI09G08780
Oryza meridionalis
OMERI09G08780
I
OLONG_006424
Oryza longistaminata
OLONG_006424
I
OGLUM09G11630
Oryza glumaepatula
OGLUM09G11630
I
OBART09G11250
Oryza barthii
OBART09G11250
I
OB09G17800
Oryza brachyantha
OB09G17800
I
MLOC_4507
Hordeum vulgare
MLOC_4507
I
fgenesh2_kg.6__2677__AT5G27880.1
Arabidopsis lyrata
fgenesh2_kg.6__2677__AT5G27880.1
N
Ca_23376
Cicer arietinum
Ca_23376
N
Bra020571
Brassica rapa
Bra020571
N
MTR_2g067740
Medicago truncatula
MTR_2g067740
N
Bo2g155500
Brassica oleracea
Bo2g155500
N
MTR_1g077700
Medicago truncatula
MTR_1g077700
N
Bostr.29827s0107
Boechera stricta
Bostr.29827s0107
N