Thhalv10025862m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10025862m.g T009988_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF054
M06647_2.00 		Arabidopsis thaliana
NNNNNNNNNHHDSCRCCGHC
GDCGGYGSHDDNNNNNNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_col_a 		0.822 0.980
ERF054
M06648_2.00 		Arabidopsis thaliana
NNNNHDBCRCCGHCM
KGDCGGYGVHDNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_colamp_a 		0.822 0.980
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.703 0.760
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.703 0.760
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.701 0.860
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.701 0.860
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.685 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10025862m AP2 143 194

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R006833 Calypte anna Aan_R006833 I
ACEP16450 Atta cephalotes ACEP16450 I
Afo_R009473 Aptenodytes forsteri Afo_R009473 I
Alligator_sinensis_CCG013281.1 Alligator sinensis Alligator_sinensis_CCG013281.1 I
Alligator_sinensis_CCG017455.1 Alligator sinensis Alligator_sinensis_CCG017455.1 I
ARID5A Bos taurus ENSBTAG00000014090 I
ARID5A Canis familiaris ENSCAFG00000006546 I
ARID5A Callithrix jacchus ENSCJAG00000007759 I
ARID5A Cavia porcellus ENSCPOG00000026444 I
arid5a Danio rerio ENSDARG00000077120 I
ARID5A Dasypus novemcinctus ENSDNOG00000035690 I
Arid5a Dipodomys ordii ENSDORG00000002540 I
ARID5A Equus caballus ENSECAG00000023667 I
ARID5A Erinaceus europaeus ENSEEUG00000008247 I
ARID5A Felis catus ENSFCAG00000024950 I
ARID5A Homo sapiens ENSG00000196843 I
ARID5A Gorilla gorilla ENSGGOG00000017068 I
ARID5A Loxodonta africana ENSLAFG00000009162 I
ARID5A Myotis lucifugus ENSMLUG00000003208 I
ARID5A Macaca mulatta ENSMMUG00000030744 I
ARID5A Monodelphis domestica ENSMODG00000008611 I
Arid5a Mus musculus ENSMUSG00000037447 D
ARID5A Oryctolagus cuniculus ENSOCUG00000012101 I
ARID5A Otolemur garnettii ENSOGAG00000004116 I
ARID5A Ochotona princeps ENSOPRG00000015571 I
ARID5A Procavia capensis ENSPCAG00000006363 I
ARID5A Pan troglodytes ENSPTRG00000012234 I
ARID5A Pteropus vampyrus ENSPVAG00000009400 I
Arid5a Rattus norvegicus ENSRNOG00000015382 D
ARID5A Sus scrofa ENSSSCG00000008123 I
ARID5B Anolis carolinensis ENSACAG00000010922 I
ARID5B Bos taurus ENSBTAG00000006729 I
ARID5B Canis familiaris ENSCAFG00000012991 I
ARID5B Choloepus hoffmanni ENSCHOG00000011695 I
ARID5B Callithrix jacchus ENSCJAG00000007072 I
arid5b Danio rerio ENSDARG00000037196 I
ARID5B Dasypus novemcinctus ENSDNOG00000043861 I
ARID5B Equus caballus ENSECAG00000019795 I
ARID5B Erinaceus europaeus ENSEEUG00000000691 I
ARID5B Echinops telfairi ENSETEG00000002612 I
ARID5B Felis catus ENSFCAG00000026767 I
ARID5B Homo sapiens ENSG00000150347 D
arid5b Gasterosteus aculeatus ENSGACG00000010603 I
ARID5B Gorilla gorilla ENSGGOG00000004127 I
ARID5B Loxodonta africana ENSLAFG00000015576 I
ARID5B Meleagris gallopavo ENSMGAG00000003626 I
ARID5B Myotis lucifugus ENSMLUG00000013447 I
ARID5B Macaca mulatta ENSMMUG00000000424 I
ARID5B Monodelphis domestica ENSMODG00000017102 I
Arid5b Mus musculus ENSMUSG00000019947 D
ARID5B Ornithorhynchus anatinus ENSOANG00000015260 I
ARID5B Oryctolagus cuniculus ENSOCUG00000027029 I
ARID5B Otolemur garnettii ENSOGAG00000015939 I
ARID5B Procavia capensis ENSPCAG00000002044 I
ARID5B Pan troglodytes ENSPTRG00000002534 I
ARID5B Pteropus vampyrus ENSPVAG00000010482 I
ARID5B Sorex araneus ENSSARG00000002423 I
ARID5B Sus scrofa ENSSSCG00000010219 I
ARID5B Taeniopygia guttata ENSTGUG00000005270 I
arid5b Tetraodon nigroviridis ENSTNIG00000007478 I
arid5b Takifugu rubripes ENSTRUG00000010671 I
arid5b Xenopus tropicalis XB-GENE-1007579 I
arid6 Danio rerio ENSDARG00000069988 D
Brh_R002693 Buceros rhinoceros Brh_R002693 I
CapteG220448 Capitella teleta CapteG220448 I
Cflo_07446--XP_395512.3_APIME Camponotus floridanus Cflo_07446--XP_395512.3_APIME I
Cmyd_10001620 Chelonia mydas Cmyd_10001620 I
Cmyd_10021475 Chelonia mydas Cmyd_10021475 I
ENSAMEG00000003626 Ailuropoda melanoleuca ENSAMEG00000003626 I
ENSAMEG00000008932 Ailuropoda melanoleuca ENSAMEG00000008932 I
ENSAMXG00000005409 Astyanax mexicanus ENSAMXG00000005409 I
ENSAMXG00000006897 Astyanax mexicanus ENSAMXG00000006897 I
ENSAMXG00000012004 Astyanax mexicanus ENSAMXG00000012004 I
ENSAPLG00000010915 Anas platyrhynchos ENSAPLG00000010915 I
ENSBTAP00000008847-D1 Bos grunniens ENSBTAP00000008847-D1 I
ENSBTAP00000026200-D1 Bos grunniens ENSBTAP00000026200-D1 I
ENSCING00000013307 Ciona intestinalis ENSCING00000013307 I
ENSCPOG00000003685 Cavia porcellus ENSCPOG00000003685 I
ENSCSAG00000007410 Chlorocebus sabaeus ENSCSAG00000007410 I
ENSCSAG00000017355 Chlorocebus sabaeus ENSCSAG00000017355 I
ENSFALG00000000299 Ficedula albicollis ENSFALG00000000299 I
ENSFALG00000013304 Ficedula albicollis ENSFALG00000013304 I
ENSGACG00000015846 Gasterosteus aculeatus ENSGACG00000015846 I
ENSGALG00000002991 Gallus gallus ENSGALG00000002991 I
ENSGALG00000027335 Gallus gallus ENSGALG00000027335 I
ENSGMOG00000004984 Gadus morhua ENSGMOG00000004984 I
ENSGMOG00000008075 Gadus morhua ENSGMOG00000008075 I
ENSLACG00000014124 Latimeria chalumnae ENSLACG00000014124 I
ENSLACG00000015032 Latimeria chalumnae ENSLACG00000015032 I
ENSLOCG00000005151 Lepisosteus oculatus ENSLOCG00000005151 I
ENSLOCG00000006809 Lepisosteus oculatus ENSLOCG00000006809 I
ENSLOCG00000012316 Lepisosteus oculatus ENSLOCG00000012316 I
ENSLOCG00000015055 Lepisosteus oculatus ENSLOCG00000015055 I
ENSMEUG00000005354 Macropus eugenii ENSMEUG00000005354 I
ENSMEUG00000014406 Macropus eugenii ENSMEUG00000014406 I
ENSMICG00000010866 Microcebus murinus ENSMICG00000010866 I
ENSMPUG00000008907 Mustela putorius furo ENSMPUG00000008907 I
ENSMPUG00000011076 Mustela putorius furo ENSMPUG00000011076 I
ENSNLEG00000012110 Nomascus leucogenys ENSNLEG00000012110 I
ENSOARG00000004403 Ovis aries ENSOARG00000004403 I
ENSONIG00000000889 Oreochromis niloticus ENSONIG00000000889 I
ENSONIG00000010644 Oreochromis niloticus ENSONIG00000010644 I
ENSORLG00000004756 Oryzias latipes ENSORLG00000004756 I
ENSORLG00000011620 Oryzias latipes ENSORLG00000011620 I
ENSORLG00000018351 Oryzias latipes ENSORLG00000018351 I
ENSP00000279873 Macaca fascicularis ENSP00000279873 I
ENSPANG00000012565 Papio anubis ENSPANG00000012565 I
ENSPANG00000022067 Papio anubis ENSPANG00000022067 I
ENSPFOG00000010024 Poecilia formosa ENSPFOG00000010024 I
ENSPFOG00000012334 Poecilia formosa ENSPFOG00000012334 I
ENSPFOG00000012795 Poecilia formosa ENSPFOG00000012795 I
ENSPFOG00000022560 Poecilia formosa ENSPFOG00000022560 I
ENSPMAG00000002699 Petromyzon marinus ENSPMAG00000002699 I
ENSPMAG00000009067 Petromyzon marinus ENSPMAG00000009067 I
ENSPPYG00000002417 Pongo abelii ENSPPYG00000002417 I
ENSPPYG00000012072 Pongo abelii ENSPPYG00000012072 I
ENSPSIG00000010908 Pelodiscus sinensis ENSPSIG00000010908 I
ENSPSIG00000014127 Pelodiscus sinensis ENSPSIG00000014127 I
ENSSHAG00000012252 Sarcophilus harrisii ENSSHAG00000012252 I
ENSSHAG00000018209 Sarcophilus harrisii ENSSHAG00000018209 I
ENSSTOG00000019546 Ictidomys tridecemlineatus ENSSTOG00000019546 I
ENSSTOG00000023423 Ictidomys tridecemlineatus ENSSTOG00000023423 I
ENSTGUG00000015609 Taeniopygia guttata ENSTGUG00000015609 I
ENSTNIG00000006278 Tetraodon nigroviridis ENSTNIG00000006278 I
ENSTNIG00000013457 Tetraodon nigroviridis ENSTNIG00000013457 I
ENSTRUG00000001547 Takifugu rubripes ENSTRUG00000001547 I
ENSTSYG00000010758 Tarsius syrichta ENSTSYG00000010758 I
ENSXMAG00000001883 Xiphophorus maculatus ENSXMAG00000001883 I
ENSXMAG00000011937 Xiphophorus maculatus ENSXMAG00000011937 I
ENSXMAG00000018209 Xiphophorus maculatus ENSXMAG00000018209 I
e_gw.4.260.1_CONSTRUCT PBM CONSTRUCTS e_gw.4.260.1_CONSTRUCT D
fgenesh2_pg.scaffold_164000022 Branchiostoma floridae fgenesh2_pg.scaffold_164000022 I
GB52601 Apis mellifera GB52601 I
Gfo_R015732 Geospiza fortis Gfo_R015732 I
Hsal_01506--XP_395512.3_APIME Harpegnathos saltator Hsal_01506--XP_395512.3_APIME I
ISCW010123 Ixodes scapularis ISCW010123 I
L798_01524 Zootermopsis nevadensis L798_01524 I
Myotis_brandtii_ARID5A_10013684 Myotis brandtii Myotis_brandtii_ARID5A_10013684 I
Myotis_brandtii_ARID5B_10031403 Myotis brandtii Myotis_brandtii_ARID5B_10031403 I
NEMVEDRAFT_v1g81183 Nematostella vectensis NEMVEDRAFT_v1g81183 I
NV18117 Nasonia vitripennis NV18117 I
Ocbimv22018673m.g Octopus bimaculoides Ocbimv22018673m.g I
Ogr03010 Ophisaurus gracilis Ogr03010 I
Ogr08677 Ophisaurus gracilis Ogr08677 I
Pvit_18395 Pogona vitticeps Pvit_18395 I
Sakowv30045810m.g Saccoglossus kowalevskii Sakowv30045810m.g I
SINV22144 Solenopsis invicta SINV22144 I
SMAR000821 Strigamia maritima SMAR000821 I
SPU_011640 Strongylocentrotus purpuratus SPU_011640 I
Tal_R007047 Tyto alba Tal_R007047 I
tetur19g00310 Tetranychus urticae tetur19g00310 I
zgc:77151 Danio rerio ENSDARG00000054307 I