chr1.LjB21G05.120.nc (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 chr1.LjB21G05.120.nc T010152_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.758 0.960
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.744 0.920
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.725 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.LjB21G05.120.nc AP2 35 86

Links

Other AP2 family TFs
Other Lotus japonicus TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28166.m001054 Ricinus communis 28166.m001054 I 0.000
AMTR_s00009p00175450 Amborella trichopoda AMTR_s00009p00175450 I 0.000
Aquca_017_00706 Aquilegia coerulea Aquca_017_00706 N 0.000
cassava24574.valid.m1 Manihot esculenta cassava24574.valid.m1 I 0.000
cassava37031.valid.m1 Manihot esculenta cassava37031.valid.m1 I 0.000
cassava37032.valid.m1 Manihot esculenta cassava37032.valid.m1 I 0.000
cassava627.valid.m1 Manihot esculenta cassava627.valid.m1 N 0.000
Ca_06956 Cicer arietinum Ca_06956 I 0.000
Ca_16355 Cicer arietinum Ca_16355 I 0.000
Ciclev10009354m.g Citrus clementina Ciclev10009354m.g I 0.000
Ciclev10016511m.g Citrus clementina Ciclev10016511m.g N 0.000
Cla001735 Citrullus lanatus Cla001735 I 0.000
Cucsa.267130 Cucumis sativus Cucsa.267130 I 0.000
Cucsa.267170 Cucumis sativus Cucsa.267170 I 0.000
Eucgr.F03420 Eucalyptus grandis Eucgr.F03420 I 0.000
evm.TU.supercontig_97.78 Carica papaya evm.TU.supercontig_97.78 I 0.000
gene03303-v1.0-hybrid Fragaria vesca gene03303-v1.0-hybrid I 0.000
gene24654-v1.0-hybrid Fragaria vesca gene24654-v1.0-hybrid I 0.000
GLYMA06G41620 Glycine max GLYMA06G41620 I 0.000
GLYMA12G16560 Glycine max GLYMA12G16560 N 0.000
GLYMA12G34300 Glycine max GLYMA12G34300 I 0.000
Gorai.002G016500 Gossypium raimondii Gorai.002G016500 N 0.000
Gorai.002G081900 Gossypium raimondii Gorai.002G081900 I 0.000
Gorai.013G164100 Gossypium raimondii Gorai.013G164100 I 0.000
Lus10011167.g Linum usitatissimum Lus10011167.g I 0.000
Lus10043076.g Linum usitatissimum Lus10043076.g I 0.000
MDP0000264803 Malus domestica MDP0000264803 I 0.000
MDP0000323291 Malus domestica MDP0000323291 N 0.000
mgf012088m Mimulus guttatus mgf012088m I 0.000
MTR_2g082640 Medicago truncatula MTR_2g082640 I 0.000
MTR_4g081370 Medicago truncatula MTR_4g081370 I 0.000
orange1.1g026599m.g Citrus sinensis orange1.1g026599m.g I 0.000
orange1.1g026702m.g Citrus sinensis orange1.1g026702m.g N 0.000
PK08705.1 Cannabis sativa PK08705.1 N 0.000
PK23013.1 Cannabis sativa PK23013.1 I 0.000
Pm029465 Prunus mume Pm029465 I 0.000
POPTR_0001s44230 Populus trichocarpa POPTR_0001s44230 I 0.000
POPTR_0011s13580 Populus trichocarpa POPTR_0011s13580 I 0.000
PRUPE_ppa009077mg Prunus persica PRUPE_ppa009077mg I 0.000
PRUPE_ppa010730mg Prunus persica PRUPE_ppa010730mg I 0.000
SapurV1A.0712s0010 Salix purpurea SapurV1A.0712s0010 I 0.000
Solyc07g064040.2 Solanum lycopersicum Solyc07g064040.2 I 0.000
TCM_031118 Theobroma cacao TCM_031118 I 0.000