chr1.LjB21G05.120.nc (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 chr1.LjB21G05.120.nc T010152_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.758 0.960
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.744 0.920
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.725 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.LjB21G05.120.nc AP2 35 86

Links

Other AP2 family TFs
Other Lotus japonicus TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LjT35E05.90.nd Lotus japonicus LjT35E05.90.nd I 0.807
PK16069.1 Cannabis sativa PK16069.1 I 0.806
Eucgr.F03772 Eucalyptus grandis Eucgr.F03772 I 0.785
LjSGA_147935.1 Lotus japonicus LjSGA_147935.1 I 0.767
ERF014 Arabidopsis thaliana AT1G44830 D 0.758
Bo6g004620 Brassica oleracea Bo6g004620 I 0.758
Bra040309 Brassica rapa Bra040309 I 0.758
fgenesh2_kg.1__3777__AT1G44830.1 Arabidopsis lyrata fgenesh2_kg.1__3777__AT1G44830.1 I 0.758
GLYMA04G43040 Glycine max GLYMA04G43040 I 0.758
GLYMA06G11700 Glycine max GLYMA06G11700 I 0.758
GLYMA13G02860 Glycine max GLYMA13G02860 I 0.758
GLYMA14G22970 Glycine max GLYMA14G22970 I 0.758
MTR_3g072610 Medicago truncatula MTR_3g072610 I 0.758
MTR_5g058470 Medicago truncatula MTR_5g058470 I 0.758
POPTR_0002s08610 Populus trichocarpa POPTR_0002s08610 I 0.758
PRUPE_ppa010649mg Prunus persica PRUPE_ppa010649mg I 0.758
TCM_035077 Theobroma cacao TCM_035077 I 0.758
Ca_25824 Cicer arietinum Ca_25824 I 0.758
Cla014165 Citrullus lanatus Cla014165 I 0.758
Pm004870 Prunus mume Pm004870 I 0.758
29908.m006165 Ricinus communis 29908.m006165 I 0.758
cassava28944.valid.m1 Manihot esculenta cassava28944.valid.m1 I 0.758
Cucsa.365220 Cucumis sativus Cucsa.365220 I 0.758
mgf021045m Mimulus guttatus mgf021045m I 0.758
Bostr.12302s0095 Boechera stricta Bostr.12302s0095 I 0.758
Cagra.1192s0001 Capsella grandiflora Cagra.1192s0001 I 0.758
Carubv10010259m.g Capsella rubella Carubv10010259m.g I 0.758
evm.TU.supercontig_36.41 Carica papaya evm.TU.supercontig_36.41 I 0.758
gene11145-v1.0-hybrid Fragaria vesca gene11145-v1.0-hybrid I 0.758
Gorai.002G220900 Gossypium raimondii Gorai.002G220900 I 0.758
Gorai.009G244500 Gossypium raimondii Gorai.009G244500 I 0.758
Gorai.010G048900 Gossypium raimondii Gorai.010G048900 I 0.758
Lus10003740.g Linum usitatissimum Lus10003740.g I 0.758
Lus10028032.g Linum usitatissimum Lus10028032.g I 0.758
MDP0000120147 Malus domestica MDP0000120147 I 0.758
MDP0000923690 Malus domestica MDP0000923690 I 0.758
SapurV1A.0010s0960 Salix purpurea SapurV1A.0010s0960 I 0.758
Thhalv10011778m.g Eutrema salsugineum Thhalv10011778m.g I 0.758
Aquca_014_00181 Aquilegia coerulea Aquca_014_00181 I 0.757
VIT_18s0001g03240 Vitis vinifera VIT_18s0001g03240 I 0.755
Cla023512 Citrullus lanatus Cla023512 I 0.755
Cucsa.372760 Cucumis sativus Cucsa.372760 I 0.755
Bo6g121400 Brassica oleracea Bo6g121400 I 0.753
Bra015660 Brassica rapa Bra015660 I 0.753
Thhalv10019045m.g Eutrema salsugineum Thhalv10019045m.g I 0.753
Ciclev10002294m.g Citrus clementina Ciclev10002294m.g I 0.752
orange1.1g039680m.g Citrus sinensis orange1.1g039680m.g I 0.752
PGSC0003DMG400000910 Solanum tuberosum PGSC0003DMG400000910 I 0.751
Solyc11g012980.1 Solanum lycopersicum Solyc11g012980.1 I 0.751
cassava44357.m1 Manihot esculenta cassava44357.m1 I 0.748
SapurV1A.0105s0160 Salix purpurea SapurV1A.0105s0160 I 0.745
SapurV1A.3198s0010 Salix purpurea SapurV1A.3198s0010 I 0.745
ERF012 Arabidopsis thaliana AT1G21910 D 0.744
BGIOSGA005542 Oryza indica BGIOSGA005542 I 0.744
Bra036022 Brassica rapa Bra036022 I 0.744
BRADI3G57867 Brachypodium distachyon BRADI3G57867 I 0.744
F775_17148 Aegilops tauschii F775_17148 I 0.744
DREB26 Arabidopsis lyrata fgenesh2_kg.1__2381__AT1G21910.1 I 0.744
GRMZM2G011110 Zea mays GRMZM2G011110 I 0.744
LPERR06G06370 Leersia perrieri LPERR06G06370 I 0.744
OGLUM02G34320 Oryza glumaepatula OGLUM02G34320 I 0.744
OMERI02G32260 Oryza meridionalis OMERI02G32260 I 0.744
ONIVA02G33600 Oryza nivara ONIVA02G33600 I 0.744
OPUNC02G31280 Oryza punctata OPUNC02G31280 I 0.744
OS02G0767800 Oryza sativa OS02G0767800 I 0.744
POPTR_0005s15830 Populus trichocarpa POPTR_0005s15830 I 0.744
Sb04g034290 Sorghum bicolor Sb04g034290 I 0.744
Bostr.12659s0041 Boechera stricta Bostr.12659s0041 I 0.744
Cagra.2306s0038 Capsella grandiflora Cagra.2306s0038 I 0.744
Carubv10010179m.g Capsella rubella Carubv10010179m.g I 0.744
Pavir.J02555 Panicum virgatum Pavir.J02555 I 0.744
Thhalv10008639m.g Eutrema salsugineum Thhalv10008639m.g I 0.744
Bo5g034880 Brassica oleracea Bo5g034880 I 0.742
GSMUA_Achr8G23240_001 Musa acuminata GSMUA_Achr8G23240_001 I 0.742
mgf023290m Mimulus guttatus mgf023290m I 0.742
LPERR02G27720 Leersia perrieri LPERR02G27720 I 0.738
BRADI1G46120 Brachypodium distachyon BRADI1G46120 I 0.737
Si007977m.g Setaria italica Si007977m.g I 0.736
Pavir.J23882 Panicum virgatum Pavir.J23882 I 0.736
Pavir.J26231 Panicum virgatum Pavir.J26231 I 0.736
GSMUA_Achr10G25270_001 Musa acuminata GSMUA_Achr10G25270_001 I 0.735
Bo8g071150 Brassica oleracea Bo8g071150 I 0.734
Bra016400 Brassica rapa Bra016400 I 0.734
GSMUA_Achr10G30100_001 Musa acuminata GSMUA_Achr10G30100_001 I 0.734
F775_20580 Aegilops tauschii F775_20580 I 0.732
MLOC_70931 Hordeum vulgare MLOC_70931 I 0.731
Sb10g006980 Sorghum bicolor Sb10g006980 I 0.730
MDP0000319736 Malus domestica MDP0000319736 I 0.730
ERF013 Arabidopsis thaliana AT1G77640 D 0.725
Bra012298 Brassica rapa Bra012298 I 0.725
fgenesh2_kg.2__2058__AT1G77640.1 Arabidopsis lyrata fgenesh2_kg.2__2058__AT1G77640.1 I 0.725
Bostr.20129s0200 Boechera stricta Bostr.20129s0200 I 0.725
Pavir.J30447 Panicum virgatum Pavir.J30447 I 0.721
GRMZM2G015281 Zea mays GRMZM2G015281 I 0.716
Sb01g040280 Sorghum bicolor Sb01g040280 I 0.716
Si039170m.g Setaria italica Si039170m.g I 0.716
Pavir.Ia03856 Panicum virgatum Pavir.Ia03856 I 0.716
Pavir.Ib01111 Panicum virgatum Pavir.Ib01111 I 0.716
Cagra.0096s0069 Capsella grandiflora Cagra.0096s0069 I 0.714
Carubv10020777m.g Capsella rubella Carubv10020777m.g I 0.714
GRMZM2G007406 Zea mays GRMZM2G007406 I 0.708
GRMZM2G084264 Zea mays GRMZM2G084264 I 0.697
GRMZM2G021369 Zea mays GRMZM2G021369 I 0.694
Bo7g059990 Brassica oleracea Bo7g059990 I 0.692
BGIOSGA022531 Oryza indica BGIOSGA022531 I 0.687
OBART06G07000 Oryza barthii OBART06G07000 I 0.687
OGLUM06G07380 Oryza glumaepatula OGLUM06G07380 I 0.687
OMERI06G08130 Oryza meridionalis OMERI06G08130 I 0.687
ONIVA06G08290 Oryza nivara ONIVA06G08290 I 0.687
OPUNC06G06600 Oryza punctata OPUNC06G06600 I 0.687
ORGLA06G0065100 Oryza glaberrima ORGLA06G0065100 I 0.687