OBART06G07000 (Oryza barthii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OBART06G07000 T003141_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.724 0.863
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.711 0.824
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.692 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART06G07000.1 AP2 65 116

Links

Other AP2 family TFs
Other Oryza barthii TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA022531 Oryza indica BGIOSGA022531 I 0.771
OGLUM06G07380 Oryza glumaepatula OGLUM06G07380 I 0.771
OMERI06G08130 Oryza meridionalis OMERI06G08130 I 0.771
ONIVA06G08290 Oryza nivara ONIVA06G08290 I 0.771
OPUNC06G06600 Oryza punctata OPUNC06G06600 I 0.771
ORGLA06G0065100 Oryza glaberrima ORGLA06G0065100 I 0.770
GRMZM2G021369 Zea mays GRMZM2G021369 I 0.754
BGIOSGA011061 Oryza indica BGIOSGA011061 I 0.732
BRADI1G67350 Brachypodium distachyon BRADI1G67350 I 0.732
LPERR03G10190 Leersia perrieri LPERR03G10190 I 0.732
OBART03G11470 Oryza barthii OBART03G11470 I 0.732
OGLUM03G11430 Oryza glumaepatula OGLUM03G11430 I 0.732
OMERI03G10750 Oryza meridionalis OMERI03G10750 I 0.732
ONIVA03G12660 Oryza nivara ONIVA03G12660 I 0.732
OPUNC03G11030 Oryza punctata OPUNC03G11030 I 0.732
ORGLA03G0110800 Oryza glaberrima ORGLA03G0110800 I 0.732
ORUFI03G11820 Oryza rufipogon ORUFI03G11820 I 0.732
OS03G0263000 Oryza sativa OS03G0263000 I 0.732
Traes_4AS_18663793B Triticum aestivum Traes_4AS_18663793B I 0.732
Traes_4BL_762F09E09 Triticum aestivum Traes_4BL_762F09E09 I 0.732
Traes_4DL_FB8B5AAEB Triticum aestivum Traes_4DL_FB8B5AAEB I 0.732
BRADI1G46120 Brachypodium distachyon BRADI1G46120 I 0.725
Si007977m.g Setaria italica Si007977m.g I 0.725
Pavir.J23882 Panicum virgatum Pavir.J23882 I 0.725
Pavir.J26231 Panicum virgatum Pavir.J26231 I 0.725
ERF014 Arabidopsis thaliana AT1G44830 D 0.724
BGIOSGA005542 Oryza indica BGIOSGA005542 I 0.724
Bo6g004620 Brassica oleracea Bo6g004620 I 0.724
Bra040309 Brassica rapa Bra040309 I 0.724
BRADI3G57867 Brachypodium distachyon BRADI3G57867 I 0.724
F775_17148 Aegilops tauschii F775_17148 I 0.724
fgenesh2_kg.1__3777__AT1G44830.1 Arabidopsis lyrata fgenesh2_kg.1__3777__AT1G44830.1 I 0.724
GLYMA04G43040 Glycine max GLYMA04G43040 I 0.724
GLYMA06G11700 Glycine max GLYMA06G11700 I 0.724
GLYMA13G02860 Glycine max GLYMA13G02860 I 0.724
GLYMA14G22970 Glycine max GLYMA14G22970 I 0.724
GRMZM2G011110 Zea mays GRMZM2G011110 I 0.724
LPERR06G06370 Leersia perrieri LPERR06G06370 I 0.724
MTR_3g072610 Medicago truncatula MTR_3g072610 I 0.724
MTR_5g058470 Medicago truncatula MTR_5g058470 I 0.724
OGLUM02G34320 Oryza glumaepatula OGLUM02G34320 I 0.724
OMERI02G32260 Oryza meridionalis OMERI02G32260 I 0.724
ONIVA02G33600 Oryza nivara ONIVA02G33600 I 0.724
OPUNC02G31280 Oryza punctata OPUNC02G31280 I 0.724
OS02G0767800 Oryza sativa OS02G0767800 I 0.724
POPTR_0002s08610 Populus trichocarpa POPTR_0002s08610 I 0.724
PRUPE_ppa010649mg Prunus persica PRUPE_ppa010649mg I 0.724
Sb04g034290 Sorghum bicolor Sb04g034290 I 0.724
TCM_035077 Theobroma cacao TCM_035077 I 0.724
Ca_25824 Cicer arietinum Ca_25824 I 0.724
Cla014165 Citrullus lanatus Cla014165 I 0.724
Pm004870 Prunus mume Pm004870 I 0.724
29908.m006165 Ricinus communis 29908.m006165 I 0.724
cassava28944.valid.m1 Manihot esculenta cassava28944.valid.m1 I 0.724
Cucsa.365220 Cucumis sativus Cucsa.365220 I 0.724
mgf021045m Mimulus guttatus mgf021045m I 0.724
Aquca_014_00181 Aquilegia coerulea Aquca_014_00181 I 0.724
Bostr.12302s0095 Boechera stricta Bostr.12302s0095 I 0.724
Cagra.1192s0001 Capsella grandiflora Cagra.1192s0001 I 0.724
Carubv10010259m.g Capsella rubella Carubv10010259m.g I 0.724
evm.TU.supercontig_36.41 Carica papaya evm.TU.supercontig_36.41 I 0.724
gene11145-v1.0-hybrid Fragaria vesca gene11145-v1.0-hybrid I 0.724
Gorai.002G220900 Gossypium raimondii Gorai.002G220900 I 0.724
Gorai.009G244500 Gossypium raimondii Gorai.009G244500 I 0.724
Gorai.010G048900 Gossypium raimondii Gorai.010G048900 I 0.724
Lus10003740.g Linum usitatissimum Lus10003740.g I 0.724
Lus10028032.g Linum usitatissimum Lus10028032.g I 0.724
MDP0000120147 Malus domestica MDP0000120147 I 0.724
MDP0000923690 Malus domestica MDP0000923690 I 0.724
Pavir.J02555 Panicum virgatum Pavir.J02555 I 0.724
SapurV1A.0010s0960 Salix purpurea SapurV1A.0010s0960 I 0.724
Thhalv10011778m.g Eutrema salsugineum Thhalv10011778m.g I 0.724
F775_20580 Aegilops tauschii F775_20580 I 0.722
GSMUA_Achr8G23240_001 Musa acuminata GSMUA_Achr8G23240_001 I 0.721
MLOC_70931 Hordeum vulgare MLOC_70931 I 0.721
VIT_18s0001g03240 Vitis vinifera VIT_18s0001g03240 I 0.721
Cla023512 Citrullus lanatus Cla023512 I 0.721
Cucsa.372760 Cucumis sativus Cucsa.372760 I 0.721
OB03G21640 Oryza brachyantha OB03G21640 I 0.720
Bo6g121400 Brassica oleracea Bo6g121400 I 0.719
Bra015660 Brassica rapa Bra015660 I 0.719
PGSC0003DMG400000910 Solanum tuberosum PGSC0003DMG400000910 I 0.719
Sb10g006980 Sorghum bicolor Sb10g006980 I 0.719
Solyc11g012980.1 Solanum lycopersicum Solyc11g012980.1 I 0.719
Thhalv10019045m.g Eutrema salsugineum Thhalv10019045m.g I 0.719
Bra012298 Brassica rapa Bra012298 I 0.718
GSMUA_Achr10G25270_001 Musa acuminata GSMUA_Achr10G25270_001 I 0.718
LPERR02G27720 Leersia perrieri LPERR02G27720 I 0.718
Ciclev10002294m.g Citrus clementina Ciclev10002294m.g I 0.718
orange1.1g039680m.g Citrus sinensis orange1.1g039680m.g I 0.718
cassava44357.m1 Manihot esculenta cassava44357.m1 I 0.714
GSMUA_Achr10G30100_001 Musa acuminata GSMUA_Achr10G30100_001 I 0.713
ERF012 Arabidopsis thaliana AT1G21910 D 0.711
Bo8g071150 Brassica oleracea Bo8g071150 I 0.711
Bra016400 Brassica rapa Bra016400 I 0.711
Bra036022 Brassica rapa Bra036022 I 0.711
DREB26 Arabidopsis lyrata fgenesh2_kg.1__2381__AT1G21910.1 I 0.711
POPTR_0005s15830 Populus trichocarpa POPTR_0005s15830 I 0.711
Bostr.12659s0041 Boechera stricta Bostr.12659s0041 I 0.711
Cagra.2306s0038 Capsella grandiflora Cagra.2306s0038 I 0.711
Carubv10010179m.g Capsella rubella Carubv10010179m.g I 0.711
SapurV1A.0105s0160 Salix purpurea SapurV1A.0105s0160 I 0.711
SapurV1A.3198s0010 Salix purpurea SapurV1A.3198s0010 I 0.711
Thhalv10008639m.g Eutrema salsugineum Thhalv10008639m.g I 0.711
Bo5g034880 Brassica oleracea Bo5g034880 I 0.710
GSMUA_Achr10G19460_001 Musa acuminata GSMUA_Achr10G19460_001 I 0.710
mgf023290m Mimulus guttatus mgf023290m I 0.709
GRMZM2G015281 Zea mays GRMZM2G015281 I 0.702
Sb01g040280 Sorghum bicolor Sb01g040280 I 0.702
Si039170m.g Setaria italica Si039170m.g I 0.702
Pavir.Ia03856 Panicum virgatum Pavir.Ia03856 I 0.702
Pavir.Ib01111 Panicum virgatum Pavir.Ib01111 I 0.702
MDP0000319736 Malus domestica MDP0000319736 I 0.697
GRMZM2G007406 Zea mays GRMZM2G007406 I 0.695
ERF013 Arabidopsis thaliana AT1G77640 D 0.692
fgenesh2_kg.2__2058__AT1G77640.1 Arabidopsis lyrata fgenesh2_kg.2__2058__AT1G77640.1 I 0.692
Bostr.20129s0200 Boechera stricta Bostr.20129s0200 I 0.692
Cagra.0096s0069 Capsella grandiflora Cagra.0096s0069 I 0.692
Carubv10020777m.g Capsella rubella Carubv10020777m.g I 0.692
PK16069.1 Cannabis sativa PK16069.1 I 0.689
chr1.LjB21G05.120.nc Lotus japonicus chr1.LjB21G05.120.nc I 0.687
LjT35E05.90.nd Lotus japonicus LjT35E05.90.nd I 0.687
GRMZM2G084264 Zea mays GRMZM2G084264 I 0.686