Eucgr.F03772 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.F03772 T008172_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.739 0.920
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.725 0.880
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.706 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F03772.1 AP2 27 78

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK16069.1 Cannabis sativa PK16069.1 I 0.787
chr1.LjB21G05.120.nc Lotus japonicus chr1.LjB21G05.120.nc I 0.785
LjT35E05.90.nd Lotus japonicus LjT35E05.90.nd I 0.785
LjSGA_147935.1 Lotus japonicus LjSGA_147935.1 I 0.758
Aquca_014_00181 Aquilegia coerulea Aquca_014_00181 I 0.740
ERF014 Arabidopsis thaliana AT1G44830 D 0.739
Bo6g004620 Brassica oleracea Bo6g004620 I 0.739
Bra040309 Brassica rapa Bra040309 I 0.739
fgenesh2_kg.1__3777__AT1G44830.1 Arabidopsis lyrata fgenesh2_kg.1__3777__AT1G44830.1 I 0.739
GLYMA04G43040 Glycine max GLYMA04G43040 I 0.739
GLYMA06G11700 Glycine max GLYMA06G11700 I 0.739
GLYMA13G02860 Glycine max GLYMA13G02860 I 0.739
GLYMA14G22970 Glycine max GLYMA14G22970 I 0.739
MTR_3g072610 Medicago truncatula MTR_3g072610 I 0.739
MTR_5g058470 Medicago truncatula MTR_5g058470 I 0.739
POPTR_0002s08610 Populus trichocarpa POPTR_0002s08610 I 0.739
PRUPE_ppa010649mg Prunus persica PRUPE_ppa010649mg I 0.739
TCM_035077 Theobroma cacao TCM_035077 I 0.739
Ca_25824 Cicer arietinum Ca_25824 I 0.739
Cla014165 Citrullus lanatus Cla014165 I 0.739
Pm004870 Prunus mume Pm004870 I 0.739
29908.m006165 Ricinus communis 29908.m006165 I 0.739
cassava28944.valid.m1 Manihot esculenta cassava28944.valid.m1 I 0.739
cassava44357.m1 Manihot esculenta cassava44357.m1 I 0.739
Cucsa.365220 Cucumis sativus Cucsa.365220 I 0.739
mgf021045m Mimulus guttatus mgf021045m I 0.739
Bostr.12302s0095 Boechera stricta Bostr.12302s0095 I 0.739
Cagra.1192s0001 Capsella grandiflora Cagra.1192s0001 I 0.739
Carubv10010259m.g Capsella rubella Carubv10010259m.g I 0.739
evm.TU.supercontig_36.41 Carica papaya evm.TU.supercontig_36.41 I 0.739
gene11145-v1.0-hybrid Fragaria vesca gene11145-v1.0-hybrid I 0.739
Gorai.002G220900 Gossypium raimondii Gorai.002G220900 I 0.739
Gorai.009G244500 Gossypium raimondii Gorai.009G244500 I 0.739
Gorai.010G048900 Gossypium raimondii Gorai.010G048900 I 0.739
Lus10003740.g Linum usitatissimum Lus10003740.g I 0.739
Lus10028032.g Linum usitatissimum Lus10028032.g I 0.739
MDP0000120147 Malus domestica MDP0000120147 I 0.739
MDP0000923690 Malus domestica MDP0000923690 I 0.739
SapurV1A.0010s0960 Salix purpurea SapurV1A.0010s0960 I 0.739
Thhalv10011778m.g Eutrema salsugineum Thhalv10011778m.g I 0.739
VIT_18s0001g03240 Vitis vinifera VIT_18s0001g03240 I 0.736
Cla023512 Citrullus lanatus Cla023512 I 0.736
Cucsa.372760 Cucumis sativus Cucsa.372760 I 0.736
Bo6g121400 Brassica oleracea Bo6g121400 I 0.734
Bra015660 Brassica rapa Bra015660 I 0.734
Thhalv10019045m.g Eutrema salsugineum Thhalv10019045m.g I 0.734
PGSC0003DMG400000910 Solanum tuberosum PGSC0003DMG400000910 I 0.733
Solyc11g012980.1 Solanum lycopersicum Solyc11g012980.1 I 0.733
Ciclev10002294m.g Citrus clementina Ciclev10002294m.g I 0.733
orange1.1g039680m.g Citrus sinensis orange1.1g039680m.g I 0.733
GRMZM2G015281 Zea mays GRMZM2G015281 I 0.729
Sb01g040280 Sorghum bicolor Sb01g040280 I 0.729
Si039170m.g Setaria italica Si039170m.g I 0.729
Pavir.Ia03856 Panicum virgatum Pavir.Ia03856 I 0.729
Pavir.Ib01111 Panicum virgatum Pavir.Ib01111 I 0.729
BGIOSGA005542 Oryza indica BGIOSGA005542 I 0.728
GRMZM2G011110 Zea mays GRMZM2G011110 I 0.728
LPERR06G06370 Leersia perrieri LPERR06G06370 I 0.728
OGLUM02G34320 Oryza glumaepatula OGLUM02G34320 I 0.728
OMERI02G32260 Oryza meridionalis OMERI02G32260 I 0.728
ONIVA02G33600 Oryza nivara ONIVA02G33600 I 0.728
OPUNC02G31280 Oryza punctata OPUNC02G31280 I 0.728
OS02G0767800 Oryza sativa OS02G0767800 I 0.728
Sb04g034290 Sorghum bicolor Sb04g034290 I 0.728
Pavir.J02555 Panicum virgatum Pavir.J02555 I 0.728
POPTR_0005s15830 Populus trichocarpa POPTR_0005s15830 I 0.727
BRADI3G57867 Brachypodium distachyon BRADI3G57867 I 0.726
F775_17148 Aegilops tauschii F775_17148 I 0.726
SapurV1A.0105s0160 Salix purpurea SapurV1A.0105s0160 I 0.726
SapurV1A.3198s0010 Salix purpurea SapurV1A.3198s0010 I 0.726
ERF012 Arabidopsis thaliana AT1G21910 D 0.725
Bo5g034880 Brassica oleracea Bo5g034880 I 0.725
Bra036022 Brassica rapa Bra036022 I 0.725
DREB26 Arabidopsis lyrata fgenesh2_kg.1__2381__AT1G21910.1 I 0.725
Bostr.12659s0041 Boechera stricta Bostr.12659s0041 I 0.725
Cagra.2306s0038 Capsella grandiflora Cagra.2306s0038 I 0.725
Carubv10010179m.g Capsella rubella Carubv10010179m.g I 0.725
Thhalv10008639m.g Eutrema salsugineum Thhalv10008639m.g I 0.725
GSMUA_Achr8G23240_001 Musa acuminata GSMUA_Achr8G23240_001 I 0.723
mgf023290m Mimulus guttatus mgf023290m I 0.723
GRMZM2G007406 Zea mays GRMZM2G007406 I 0.721
LPERR02G27720 Leersia perrieri LPERR02G27720 I 0.721
Si007977m.g Setaria italica Si007977m.g I 0.719
Pavir.J23882 Panicum virgatum Pavir.J23882 I 0.719
Pavir.J26231 Panicum virgatum Pavir.J26231 I 0.719
BRADI1G46120 Brachypodium distachyon BRADI1G46120 I 0.718
GSMUA_Achr10G25270_001 Musa acuminata GSMUA_Achr10G25270_001 I 0.718
GSMUA_Achr10G30100_001 Musa acuminata GSMUA_Achr10G30100_001 I 0.717
F775_20580 Aegilops tauschii F775_20580 I 0.716
Bo8g071150 Brassica oleracea Bo8g071150 I 0.715
Bra016400 Brassica rapa Bra016400 I 0.715
MLOC_70931 Hordeum vulgare MLOC_70931 I 0.715
Sb10g006980 Sorghum bicolor Sb10g006980 I 0.713
MDP0000319736 Malus domestica MDP0000319736 I 0.711
ERF013 Arabidopsis thaliana AT1G77640 D 0.706
Bra012298 Brassica rapa Bra012298 I 0.706
fgenesh2_kg.2__2058__AT1G77640.1 Arabidopsis lyrata fgenesh2_kg.2__2058__AT1G77640.1 I 0.706
Bostr.20129s0200 Boechera stricta Bostr.20129s0200 I 0.706
Pavir.J30447 Panicum virgatum Pavir.J30447 I 0.704
GRMZM2G084264 Zea mays GRMZM2G084264 I 0.700
Cagra.0096s0069 Capsella grandiflora Cagra.0096s0069 I 0.696
Carubv10020777m.g Capsella rubella Carubv10020777m.g I 0.696
BRADI1G67350 Brachypodium distachyon BRADI1G67350 I 0.685
Traes_4AS_18663793B Triticum aestivum Traes_4AS_18663793B I 0.685
Traes_4BL_762F09E09 Triticum aestivum Traes_4BL_762F09E09 I 0.685
Traes_4DL_FB8B5AAEB Triticum aestivum Traes_4DL_FB8B5AAEB I 0.685
BGIOSGA011061 Oryza indica BGIOSGA011061 I 0.679
LPERR03G10190 Leersia perrieri LPERR03G10190 I 0.679
OBART03G11470 Oryza barthii OBART03G11470 I 0.679
OGLUM03G11430 Oryza glumaepatula OGLUM03G11430 I 0.679
OMERI03G10750 Oryza meridionalis OMERI03G10750 I 0.679
ONIVA03G12660 Oryza nivara ONIVA03G12660 I 0.679
OPUNC03G11030 Oryza punctata OPUNC03G11030 I 0.679
ORGLA03G0110800 Oryza glaberrima ORGLA03G0110800 I 0.679
ORUFI03G11820 Oryza rufipogon ORUFI03G11820 I 0.679
OS03G0263000 Oryza sativa OS03G0263000 I 0.679
GRMZM2G021369 Zea mays GRMZM2G021369 I 0.677