OS08G0428800 (Oryza sativa)
AT hook

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02178 (AT_hook) IPR017956 OS08G0428800 T017698_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMGA
M01671_2.00 		Arabidopsis thaliana
NNNNDWAWH
DWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH7395 		0.991 0.712
HMG-I Y
M02652_2.00 		Pisum sativum
NDWVAAANRVMRWMAY
RTKWYKBYNTTTBWHN		 SELEX
Mathelier et al.(2014)
MA0045.1 		0.991 0.692
NCU01145
M01693_2.00 		Neurospora crassa
RWATAWWTNN
NNAWWTATWY		 PBM
Weirauch et al.(2014)
pTH8916 		0.991 0.500
HMGA1
M09769_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_01 		0.991 0.442
HMGA1
M09770_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_Q4 		0.991 0.442
ENSPPYG00000004736
M01685_2.00 		Pongo abelii
NNNNDWWW
WWWHNNNN		 PBM
Weirauch et al.(2014)
pTH9279 		0.991 0.423
Hmga2
M00751_2.00 		Mus musculus
NNNNRHWWNN
NNWWDYNNNN		 PBM
Weirauch et al.(2013)
pTH3046 		0.991 0.404
HMGA2
M09771_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGA2_01 		0.991 0.404
athp-3
M01691_2.00 		Caenorhabditis elegans
NNDDWDH
DHWHHNN		 PBM
Weirauch et al.(2014)
pTH9097 		0.991 0.387
FGRRES_05233
M01104_2.00 		Fusarium graminearum
NNNDWWAWWH
DWWTWWHNNN		 PBM
Lambert et al.(2019)
pTH11377 		0.991 0.385
ANIA_01690
M01675_2.00 		Aspergillus nidulans
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH8216 		0.991 0.365
NCU05635
M01694_2.00 		Neurospora crassa
NNNWWWWNNN
NNNWWWWNNN		 PBM
Weirauch et al.(2014)
pTH8863 		0.991 0.346
Q7DLU9_PEA
M09772_2.00 		Pisum sativum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HMGIY_01 		0.991 0.308
hmg-12
M01690_2.00 		Caenorhabditis elegans
NNAWWTAWWTNN
NNAWWTAWWTNN		 PBM
Weirauch et al.(2014)
pTH8997 		0.991 0.296
SUM1
M00008_2.00 		Saccharomyces cerevisiae
NNDWWWH
DWWWHNN		 PBM
Badis et al.(2008)
SUM1_2124 		0.991 0.288
SUM1
M07439_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0398.1 		0.991 0.288
SUM1
M08478_2.00 		Saccharomyces cerevisiae
RYGWCASWAAW
WTTWSTGWCRY		 Misc
DeBoer et al.(2011)
YDR310C_383 		0.991 0.288
SUM1
M08479_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 Misc
DeBoer et al.(2011)
YDR310C_478 		0.991 0.288
AHL13
M01672_2.00 		Arabidopsis thaliana
NAWWTAWWWN
NWWWTAWWTN		 PBM
Weirauch et al.(2014)
pTH8202 		0.991 0.269
BRADI3G55950
M01673_2.00 		Brachypodium distachyon
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH9369 		0.991 0.269
FGRRES_17512
M01105_2.00 		Fusarium graminearum
NNNDNWWWW
WWWWNHNNN		 PBM
Lambert et al.(2019)
pTH11412 		0.991 0.269
OS02G0824300
M01688_2.00 		Oryza sativa
NNDWAWWN
NWWTWHNN		 PBM
Weirauch et al.(2014)
pTH8406 		0.991 0.269
VIT_08s0007g04020
M01689_2.00 		Vitis vinifera
DBNDDDDDDN
NHHHHHHNVH		 PBM
Weirauch et al.(2014)
pTH9295 		0.991 0.269
TVAG_474020
M01106_2.00 		Trichomonas vaginalis
DNWWWAWW
WWTWWWNH		 PBM
Lambert et al.(2019)
pTH11493 		0.991 0.250
ATEG_07399
M01676_2.00 		Aspergillus terreus
DHNNHNDWWW
WWWHNDNNDH		 PBM
Weirauch et al.(2014)
pTH9237 		0.991 0.154
Ahctf1
M00750_2.00 		Mus musculus
AAAWAWAW
ATWTWTTT		 PBM
Weirauch et al.(2013)
pTH2361 		0.991 0.154
BRADI5G22430
M01674_2.00 		Brachypodium distachyon
VNRDDDHDD
HHDHHHYNB		 PBM
Weirauch et al.(2014)
pTH9242 		0.991 0.135
ENSACAG00000014978
M01677_2.00 		Anolis carolinensis
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9222 		0.991 0.135
phf21ab
M01678_2.00 		Danio rerio
NNNDNADW
WHTNHNNN		 PBM
Weirauch et al.(2014)
pTH9254 		0.991 0.135
kmt2cb
M01679_2.00 		Danio rerio
WWAWAWAT
ATWTWTWW		 PBM
Weirauch et al.(2014)
pTH7876 		0.991 0.135
phf21ab
M01680_2.00 		Gasterosteus aculeatus
AAAAWAAA
TTTWTTTT		 PBM
Weirauch et al.(2014)
pTH9180 		0.991 0.135
PHF21A
M01681_2.00 		Meleagris gallopavo
HDNHNNDNHD
HDNHNNDNHD		 PBM
Weirauch et al.(2014)
pTH7875 		0.991 0.135
PHF21A
M01103_2.00 		Monodelphis domestica
NNNAWATWAATN
NATTWATWTNNN		 PBM
Lambert et al.(2019)
pTH9309 		0.991 0.135
PHF21A
M01682_2.00 		Monodelphis domestica
NNNNNHRH
DYDNNNNN		 PBM
Weirauch et al.(2014)
pTH9335 		0.991 0.135
Phf21a
M01684_2.00 		Mus musculus
NNNATATWAATN
NATTWATATNNN		 PBM
Weirauch et al.(2014)
pTH8550 		0.991 0.135
Xrp1
M01686_2.00 		Drosophila melanogaster
NNNNDWAWW
WWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH9260 		0.991 0.135
MTR_4g101990
M01687_2.00 		Medicago truncatula
AAAWTAAT
ATTAWTTT		 PBM
Weirauch et al.(2014)
pTH9209 		0.991 0.135
estExt_fgeneshNG_pg.C_820014
M01692_2.00 		Naegleria gruberi
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9380 		0.991 0.135
PK26376.1
M01108_2.00 		Cannabis sativa
DDWWWAWW
WWTWWWHH		 PBM
Lambert et al.(2019)
pTH11261 		0.991 0.135
Xrp1
M05900_2.00 		Drosophila melanogaster
RTKRYGYAAT
ATTRCRYMAY		 B1H
Zhu et al.(2011)
Xrp1_CG6272_SANGER_5_FBgn0261113 		0.991 0.135
Setbp1
M01683_2.00 		Mus musculus
NDNNNNNNHN
NDNNNNNNHN		 PBM
Weirauch et al.(2014)
pTH1294 		0.991 0.115
PK00377.1
M01107_2.00 		Cannabis sativa
DAWWWAWW
WWTWWWTH		 PBM
Lambert et al.(2019)
pTH11338 		0.991 0.115
SUM1
M01517_2.00 		Saccharomyces cerevisiae
NNNDWAWW
WWTWHNNN		 PBM
Zhu et al.(2009)
Sum1 		0.991 0.000
For this family, TFs with SR scores > 0.990 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS08T0428800-00 AT hook 88 100
OS08T0428800-00 AT hook 112 124
OS08T0428800-00 AT hook 130 142
OS08T0428800-00 AT hook 158 170

Links

Other AT hook family TFs
Other Oryza sativa TFs

1072 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_01197 Capronia coronata A1O1_01197 I
A1O3_08778 Capronia epimyces A1O3_08778 I
A1O7_01726 Cladophialophora yegresii A1O7_01726 I
AMAG_00757 Allomyces macrogynus AMAG_00757 N
AMAG_02260 Allomyces macrogynus AMAG_02260 N
BGIOSGA002908 Oryza indica BGIOSGA002908 N
BGIOSGA019295 Oryza indica BGIOSGA019295 N
BRADI2G05430 Brachypodium distachyon BRADI2G05430 N
BRADI2G33580 Brachypodium distachyon BRADI2G33580 N
F775_29723 Aegilops tauschii F775_29723 I
G647_10093 Cladophialophora carrionii G647_10093 I
GRMZM2G032252 Zea mays GRMZM2G032252 N
GRMZM5G842484 Zea mays GRMZM5G842484 N
HMPREF1120_00213 Exophiala dermatitidis HMPREF1120_00213 I
LPERR01G05200 Leersia perrieri LPERR01G05200 N
LPERR05G04880 Leersia perrieri LPERR05G04880 N
M7I_1578 Glarea lozoyensis M7I_1578 I
MBM_02410 Marssonina brunnea MBM_02410 I
mgf024995m Mimulus guttatus mgf024995m I
MLOC_27773 Hordeum vulgare MLOC_27773 I
MLOC_6673 Hordeum vulgare MLOC_6673 N
OB01G15440 Oryza brachyantha OB01G15440 N
OB05G15230 Oryza brachyantha OB05G15230 N
OBART01G05540 Oryza barthii OBART01G05540 N
OBART05G05520 Oryza barthii OBART05G05520 N
OGLUM01G06010 Oryza glumaepatula OGLUM01G06010 N
OGLUM05G05400 Oryza glumaepatula OGLUM05G05400 N
OLONG_012679 Oryza longistaminata OLONG_012679 N
OLONG_023518 Oryza longistaminata OLONG_023518 N
OMERI01G05760 Oryza meridionalis OMERI01G05760 N
OMERI05G05210 Oryza meridionalis OMERI05G05210 N
ONIVA01G06280 Oryza nivara ONIVA01G06280 N
ONIVA05G05990 Oryza nivara ONIVA05G05990 N
OPUNC01G05380 Oryza punctata OPUNC01G05380 N
OPUNC02G20230 Oryza punctata OPUNC02G20230 N
OPUNC05G05150 Oryza punctata OPUNC05G05150 N
ORGLA01G0051500 Oryza glaberrima ORGLA01G0051500 N
ORGLA05G0049600 Oryza glaberrima ORGLA05G0049600 N
ORUFI01G05970 Oryza rufipogon ORUFI01G05970 N
ORUFI05G05850 Oryza rufipogon ORUFI05G05850 N
Pavir.Ca01033 Panicum virgatum Pavir.Ca01033 N
Pavir.Ea00282 Panicum virgatum Pavir.Ea00282 N
Pavir.J08546 Panicum virgatum Pavir.J08546 N
Pavir.J10741 Panicum virgatum Pavir.J10741 N
Pavir.J20558 Panicum virgatum Pavir.J20558 N
PV05_09944 Exophiala xenobiotica PV05_09944 I
PV06_04154 Exophiala oligosperma PV06_04154 I
PV08_04655 Exophiala spinifera PV08_04655 I
PV11_09703 Exophiala sideris PV11_09703 I
Sb03g003450 Sorghum bicolor Sb03g003450 N
Sb09g005650 Sorghum bicolor Sb09g005650 N
SELMODRAFT_159743 Selaginella moellendorffii SELMODRAFT_159743 I
SELMODRAFT_166865 Selaginella moellendorffii SELMODRAFT_166865 I
Si000646m.g Setaria italica Si000646m.g N
Si021575m.g Setaria italica Si021575m.g N
Si024096m.g Setaria italica Si024096m.g N
SSRP1-A Oryza sativa OS01G0184900 N
SSRP1-B Oryza sativa OS05G0182600 N
TRAES3BF096800150CFD_g Triticum aestivum TRAES3BF096800150CFD_g N
Traes_1AS_3FCB35E65 Triticum aestivum Traes_1AS_3FCB35E65 I
Traes_1BS_15F9D276D Triticum aestivum Traes_1BS_15F9D276D I
Traes_1DS_C7F1E9F38 Triticum aestivum Traes_1DS_C7F1E9F38 I
Traes_3AS_AAAAD30B5 Triticum aestivum Traes_3AS_AAAAD30B5 N
TRIUR3_14091 Triticum urartu TRIUR3_14091 N
Z518_04911 Rhinocladiella mackenziei Z518_04911 I