CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PDK_20s1595621g002
(
Phoenix dactylifera
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
PDK_20s1595621g002
T024479_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1595621g002
B3
173
264
FVKSMLRSHVSSCFWLGLPSKFCKENLPPHEMIMVLEDENGLEYDAIYIGNRTGLSGGWRAFAMDHKLEDGDALVFELVKPDRFKVYIIKAI
Links
Other
B3
family TFs
Other
Phoenix dactylifera
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA017853
Oryza indica
BGIOSGA017853
N
0.761
BRADI2G22130
Brachypodium distachyon
BRADI2G22130
N
0.772
Ca_15677
Cicer arietinum
Ca_15677
N
0.728
F775_06506
Aegilops tauschii
F775_06506
N
0.739
GLYMA02G40400
Glycine max
GLYMA02G40400
N
0.725
GRMZM2G174610
Zea mays
GRMZM2G174610
N
0.761
GSMUA_AchrUn_randomG18890_001
Musa acuminata
GSMUA_AchrUn_randomG18890_001
N
0.772
LPERR05G16310
Leersia perrieri
LPERR05G16310
N
0.761
MLOC_14005
Hordeum vulgare
MLOC_14005
N
0.739
MTR_2g102450
Medicago truncatula
MTR_2g102450
N
0.707
OB05G28010
Oryza brachyantha
OB05G28010
N
0.761
OBART05G20480
Oryza barthii
OBART05G20480
N
0.761
OGLUM05G21650
Oryza glumaepatula
OGLUM05G21650
N
0.761
OMERI05G18410
Oryza meridionalis
OMERI05G18410
N
0.728
ONIVA02G25740
Oryza nivara
ONIVA02G25740
N
0.761
OPUNC05G18160
Oryza punctata
OPUNC05G18160
N
0.761
ORGLA05G0178700
Oryza glaberrima
ORGLA05G0178700
N
0.761
ORUFI05G21790
Oryza rufipogon
ORUFI05G21790
N
0.761
OS05G0481400
Oryza sativa
OS05G0481400
N
0.761
Pavir.J00951
Panicum virgatum
Pavir.J00951
N
0.750
Pavir.J04157
Panicum virgatum
Pavir.J04157
N
0.761
Pm000222
Prunus mume
Pm000222
N
0.714
Sb09g023630
Sorghum bicolor
Sb09g023630
N
0.761
Si022916m.g
Setaria italica
Si022916m.g
N
0.772
Traes_1AL_C340A8E74
Triticum aestivum
Traes_1AL_C340A8E74
N
0.728
Traes_1BL_A8FC9D468
Triticum aestivum
Traes_1BL_A8FC9D468
N
0.736
Traes_1DL_1806CFE5F
Triticum aestivum
Traes_1DL_1806CFE5F
N
0.739
Traes_1DL_1806CFE5F1
Triticum aestivum
Traes_1DL_1806CFE5F1
N
0.739
TRIUR3_13028
Triticum urartu
TRIUR3_13028
N
0.739
VIT_06s0004g08270
Vitis vinifera
VIT_06s0004g08270
N
0.728