fgenesh2_kg.2__186__AT1G62975.1 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 fgenesh2_kg.2__186__AT1G62975.1 T039120_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT4G25400
M09786_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G25400_01 		0.850 0.615
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.2__186__AT1G62975.1 bHLH 73 125

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT4G25400 Arabidopsis thaliana AT4G25400 D 0.850
AT5G51780 Arabidopsis thaliana AT5G51780 I 0.850
BHLH125 Arabidopsis thaliana AT1G62975 I 0.914
Bo7g110280 Brassica oleracea Bo7g110280 I 0.850
Bostr.13671s0206 Boechera stricta Bostr.13671s0206 I 0.862
Bostr.22157s0026 Boechera stricta Bostr.22157s0026 I 0.914
Bostr.7867s0349 Boechera stricta Bostr.7867s0349 I 0.850
Cagra.1670s0006 Capsella grandiflora Cagra.1670s0006 I 0.914
Carubv10020804m.g Capsella rubella Carubv10020804m.g I 0.914
fgenesh2_kg.8__1059__AT5G51780.1 Arabidopsis lyrata fgenesh2_kg.8__1059__AT5G51780.1 I 0.850
Thhalv10009922m.g Eutrema salsugineum Thhalv10009922m.g I 0.863
Thhalv10026341m.g Eutrema salsugineum Thhalv10026341m.g I 0.850