Bostr.13671s0206 (Boechera stricta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Bostr.13671s0206 T049073_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT4G25400
M09786_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G25400_01 		0.850 0.577
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.13671s0206.1.p bHLH 75 127

Links

Other bHLH family TFs
Other Boechera stricta TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10009922m.g Eutrema salsugineum Thhalv10009922m.g I 0.883
Carubv10011792m.g Capsella rubella Carubv10011792m.g N 0.871
Cagra.0568s0165 Capsella grandiflora Cagra.0568s0165 N 0.871
Thhalv10026341m.g Eutrema salsugineum Thhalv10026341m.g I 0.871
fgenesh2_kg.8__1059__AT5G51780.1 Arabidopsis lyrata fgenesh2_kg.8__1059__AT5G51780.1 I 0.871
Bo7g110280 Brassica oleracea Bo7g110280 I 0.871
AT5G51780 Arabidopsis thaliana AT5G51780 I 0.871
Carubv10020804m.g Capsella rubella Carubv10020804m.g I 0.862
Cagra.1670s0006 Capsella grandiflora Cagra.1670s0006 I 0.862
fgenesh2_kg.2__186__AT1G62975.1 Arabidopsis lyrata fgenesh2_kg.2__186__AT1G62975.1 I 0.862
BHLH125 Arabidopsis thaliana AT1G62975 I 0.862
Bostr.22157s0026 Boechera stricta Bostr.22157s0026 I 0.862
Bra019167 Brassica rapa Bra019167 I 0.858
BHLH55 Arabidopsis thaliana AT1G12540 N 0.855
Cagra.0277s0021 Capsella grandiflora Cagra.0277s0021 I 0.851
Carubv10027166m.g Capsella rubella Carubv10027166m.g I 0.851
MDP0000246258 Malus domestica MDP0000246258 I 0.851
LjSGA_023375.1 Lotus japonicus LjSGA_023375.1 I 0.851
cassava43207.valid.m1 Manihot esculenta cassava43207.valid.m1 I 0.851
Bostr.15774s0324 Boechera stricta Bostr.15774s0324 I 0.851
Pm019419 Prunus mume Pm019419 I 0.851
POPTR_0012s14080 Populus trichocarpa POPTR_0012s14080 I 0.851
Bostr.7867s0349 Boechera stricta Bostr.7867s0349 I 0.850
AT4G25400 Arabidopsis thaliana AT4G25400 D 0.850
Bra022562 Brassica rapa Bra022562 I 0.847
PK11667.1 Cannabis sativa PK11667.1 I 0.840
PK15358.1 Cannabis sativa PK15358.1 I 0.840
GLYMA09G27610 Glycine max GLYMA09G27610 I 0.840
GLYMA16G32610 Glycine max GLYMA16G32610 I 0.840
Ca_22233 Cicer arietinum Ca_22233 I 0.840
Solyc06g035490.2 Solanum lycopersicum Solyc06g035490.2 I 0.840
MTR_0007s0330 Medicago truncatula MTR_0007s0330 N 0.840
cassava45968.m1 Manihot esculenta cassava45968.m1 I 0.838