GLYMA17G08980 (Glycine max)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 GLYMA17G08980 T039735_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
fgenesh1_pg.scaffold_37000071
M01757_2.00 		Physcomitrella patens
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8584 		0.901 0.902
BIM1
M01710_2.00 		Arabidopsis thaliana
NCRCGTGNNN
NNNCACGYGN		 PBM
Weirauch et al.(2014)
pTH8114 		0.873 0.922
BIM1
M06739_2.00 		Arabidopsis thaliana
CACGTGAYNHNNNH
DNNNDNRTCACGTG		 Dap-seq
OMalley et al.(2016)
BIM1_col_a 		0.873 0.922
BIM1
M06740_2.00 		Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN
NNNDNDNDNDDRKCACGTGMBN		 Dap-seq
OMalley et al.(2016)
BIM1_colamp_a 		0.873 0.922
BIM1
M09787_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BIM1_01 		0.873 0.922
BIM2
M01701_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8089 		0.852 0.765
BIM2
M06727_2.00 		Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN
NNNNNNNNNNNVDCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_colamp 		0.852 0.765
BIM2
M06728_2.00 		Arabidopsis thaliana
CACGTGMBNNNCVYV
BRBGNNNVKCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_col_v3b 		0.852 0.765
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA17G08980.1 bHLH 265 315

Links

Other bHLH family TFs
Other Glycine max TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29790.m000843 Ricinus communis 29790.m000843 I 0.852
30138.m003899 Ricinus communis 30138.m003899 I 0.883
30138.m003913 Ricinus communis 30138.m003913 I 0.879
AMTR_s00006p00250310 Amborella trichopoda AMTR_s00006p00250310 I 0.901
Aquca_002_00952 Aquilegia coerulea Aquca_002_00952 I 0.873
BGIOSGA005697 Oryza indica BGIOSGA005697 I 0.865
BGIOSGA028888 Oryza indica BGIOSGA028888 I 0.901
BGIOSGA030958 Oryza indica BGIOSGA030958 I 0.874
BIM1 Arabidopsis thaliana AT5G08130 D 0.873
BIM1 Arabidopsis lyrata scaffold_600819.1 I 0.873
BIM1 Vitis vinifera VIT_17s0000g04790 I 0.903
BIM2 Arabidopsis thaliana AT1G69010 D 0.852
BIM2 Arabidopsis lyrata fgenesh2_kg.2__1159__AT1G69010.1 I 0.852
BIM2 Vitis vinifera VIT_01s0010g00540 I 0.883
BIM3 Vitis vinifera VIT_14s0083g00930 I 0.852
Bo2g062560 Brassica oleracea Bo2g062560 I 0.852
Bo2g161110 Brassica oleracea Bo2g161110 I 0.873
Bo3g004690 Brassica oleracea Bo3g004690 I 0.873
Bo5g020460 Brassica oleracea Bo5g020460 I 0.873
Bo6g108530 Brassica oleracea Bo6g108530 I 0.852
Bo9g174770 Brassica oleracea Bo9g174770 I 0.873
Bostr.10273s0468 Boechera stricta Bostr.10273s0468 I 0.852
Bostr.13129s0152 Boechera stricta Bostr.13129s0152 I 0.873
Bra004355 Brassica rapa Bra004355 I 0.852
Bra005969 Brassica rapa Bra005969 I 0.870
Bra009322 Brassica rapa Bra009322 I 0.873
Bra029354 Brassica rapa Bra029354 I 0.873
Bra038332 Brassica rapa Bra038332 I 0.852
BRADI3G38970 Brachypodium distachyon BRADI3G38970 I 0.901
BRADI4G32967 Brachypodium distachyon BRADI4G32967 I 0.874
Cagra.1157s0023 Capsella grandiflora Cagra.1157s0023 I 0.852
Cagra.1365s0019 Capsella grandiflora Cagra.1365s0019 I 0.873
Carubv10000655m.g Capsella rubella Carubv10000655m.g I 0.873
Carubv10020679m.g Capsella rubella Carubv10020679m.g I 0.852
cassava14.valid.m1 Manihot esculenta cassava14.valid.m1 I 0.852
cassava15.valid.m1 Manihot esculenta cassava15.valid.m1 I 0.852
cassava29314.valid.m1 Manihot esculenta cassava29314.valid.m1 I 0.883
cassava29318.valid.m1 Manihot esculenta cassava29318.valid.m1 I 0.903
cassava43370.valid.m1 Manihot esculenta cassava43370.valid.m1 I 0.883
cassava43379.valid.m1 Manihot esculenta cassava43379.valid.m1 I 0.903
Ca_22043 Cicer arietinum Ca_22043 I 0.852
Ciclev10020248m.g Citrus clementina Ciclev10020248m.g I 0.903
Ciclev10032020m.g Citrus clementina Ciclev10032020m.g I 0.883
Cla018818 Citrullus lanatus Cla018818 I 0.861
Cla022382 Citrullus lanatus Cla022382 I 0.883
Cucsa.113490 Cucumis sativus Cucsa.113490 I 0.873
Cucsa.174600 Cucumis sativus Cucsa.174600 I 0.852
Cucsa.198520 Cucumis sativus Cucsa.198520 I 0.914
Cucsa.328060 Cucumis sativus Cucsa.328060 I 0.883
estExt_fgenesh1_pg.C_2110039 Physcomitrella patens estExt_fgenesh1_pg.C_2110039 I 0.901
Eucgr.B00645 Eucalyptus grandis Eucgr.B00645 I 0.873
Eucgr.B03113 Eucalyptus grandis Eucgr.B03113 I 0.852
Eucgr.I02069 Eucalyptus grandis Eucgr.I02069 I 0.852
evm.TU.supercontig_289.6 Carica papaya evm.TU.supercontig_289.6 I 0.870
evm.TU.supercontig_3.225 Carica papaya evm.TU.supercontig_3.225 I 0.903
F775_23096 Aegilops tauschii F775_23096 I 0.874
fgenesh1_pg.scaffold_37000071 Physcomitrella patens fgenesh1_pg.scaffold_37000071 D 0.901
gene04534-v1.0-hybrid Fragaria vesca gene04534-v1.0-hybrid I 0.883
gene26139-v1.0-hybrid Fragaria vesca gene26139-v1.0-hybrid I 0.858
GLYMA01G09010 Glycine max GLYMA01G09010 I 0.883
GLYMA02G13670 Glycine max GLYMA02G13670 I 0.883
GLYMA05G07490 Glycine max GLYMA05G07490 I 0.903
GLYMA08G28010 Glycine max GLYMA08G28010 I 0.852
GLYMA18G51080 Glycine max GLYMA18G51080 I 0.852
Gorai.001G197500 Gossypium raimondii Gorai.001G197500 I 0.852
Gorai.006G269200 Gossypium raimondii Gorai.006G269200 I 0.860
Gorai.007G040600 Gossypium raimondii Gorai.007G040600 I 0.852
Gorai.009G327300 Gossypium raimondii Gorai.009G327300 I 0.864
Gorai.013G098000 Gossypium raimondii Gorai.013G098000 I 0.852
GRMZM2G009478 Zea mays GRMZM2G009478 I 0.874
GRMZM2G089501 Zea mays GRMZM2G089501 I 0.874
GRMZM2G317450 Zea mays GRMZM2G317450 I 0.865
GSMUA_Achr2G05450_001 Musa acuminata GSMUA_Achr2G05450_001 I 0.879
GSMUA_Achr3G10640_001 Musa acuminata GSMUA_Achr3G10640_001 I 0.867
GSMUA_Achr4G19530_001 Musa acuminata GSMUA_Achr4G19530_001 I 0.879
GSMUA_Achr9G19110_001 Musa acuminata GSMUA_Achr9G19110_001 I 0.879
GSMUA_Achr9G28050_001 Musa acuminata GSMUA_Achr9G28050_001 I 0.890
gw1.90.123.1 Physcomitrella patens gw1.90.123.1 I 0.901
LPERR08G15680 Leersia perrieri LPERR08G15680 I 0.877
LPERR09G10080 Leersia perrieri LPERR09G10080 I 0.874
Lus10004630.g Linum usitatissimum Lus10004630.g I 0.852
Lus10007974.g Linum usitatissimum Lus10007974.g I 0.867
Lus10013502.g Linum usitatissimum Lus10013502.g I 0.867
Lus10026684.g Linum usitatissimum Lus10026684.g I 0.852
MDP0000261293 Malus domestica MDP0000261293 I 0.883
mgf001137m Mimulus guttatus mgf001137m I 0.873
mgf005849m Mimulus guttatus mgf005849m I 0.873
mgf011829m Mimulus guttatus mgf011829m I 0.852
mgf013208m Mimulus guttatus mgf013208m I 0.883
MTR_4g110040 Medicago truncatula MTR_4g110040 I 0.903
MTR_5g048350 Medicago truncatula MTR_5g048350 I 0.852
MTR_7g017320 Medicago truncatula MTR_7g017320 I 0.852
OB02G38020 Oryza brachyantha OB02G38020 I 0.865
OB08G25940 Oryza brachyantha OB08G25940 I 0.901
OBART09G13850 Oryza barthii OBART09G13850 I 0.874
OGLUM08G19830 Oryza glumaepatula OGLUM08G19830 I 0.901
OGLUM09G14430 Oryza glumaepatula OGLUM09G14430 I 0.874
OLONG_003583 Oryza longistaminata OLONG_003583 I 0.901
OLONG_020060 Oryza longistaminata OLONG_020060 I 0.874
OMERI09G10560 Oryza meridionalis OMERI09G10560 I 0.874
ONIVA08G20800 Oryza nivara ONIVA08G20800 I 0.901
ONIVA09G14370 Oryza nivara ONIVA09G14370 I 0.874
OPUNC08G16820 Oryza punctata OPUNC08G16820 I 0.901
OPUNC09G12310 Oryza punctata OPUNC09G12310 I 0.874
orange1.1g019960m.g Citrus sinensis orange1.1g019960m.g I 0.883
orange1.1g038451m.g Citrus sinensis orange1.1g038451m.g I 0.903
ORGLA02G0264700 Oryza glaberrima ORGLA02G0264700 I 0.865
ORGLA06G0286200 Oryza glaberrima ORGLA06G0286200 I 0.874
ORGLA08G0164200 Oryza glaberrima ORGLA08G0164200 I 0.901
ORGLA09G0105800 Oryza glaberrima ORGLA09G0105800 I 0.874
ORUFI08G21030 Oryza rufipogon ORUFI08G21030 I 0.901
ORUFI09G14830 Oryza rufipogon ORUFI09G14830 I 0.874
OS02G0726700 Oryza sativa OS02G0726700 I 0.865
OS08G0490000 Oryza sativa OS08G0490000 I 0.901
OS09G0475400 Oryza sativa OS09G0475400 I 0.874
Pavir.Aa00700 Panicum virgatum Pavir.Aa00700 I 0.865
Pavir.Ab03017 Panicum virgatum Pavir.Ab03017 I 0.865
Pavir.Fb01833 Panicum virgatum Pavir.Fb01833 I 0.870
Pavir.J04606 Panicum virgatum Pavir.J04606 I 0.874
Pavir.J38910 Panicum virgatum Pavir.J38910 I 0.870
PGSC0003DMG400001919 Solanum tuberosum PGSC0003DMG400001919 I 0.883
PGSC0003DMG400019654 Solanum tuberosum PGSC0003DMG400019654 I 0.883
PK00238.1 Cannabis sativa PK00238.1 I 0.852
PK01364.1 Cannabis sativa PK01364.1 I 0.880
PK10562.1 Cannabis sativa PK10562.1 I 0.873
POPTR_0004s11180 Populus trichocarpa POPTR_0004s11180 I 0.852
POPTR_0008s11120 Populus trichocarpa POPTR_0008s11120 I 0.883
POPTR_0010s14740 Populus trichocarpa POPTR_0010s14740 I 0.883
POPTR_0012s06650 Populus trichocarpa POPTR_0012s06650 I 0.860
POPTR_0015s03550 Populus trichocarpa POPTR_0015s03550 I 0.903
POPTR_0017s13610 Populus trichocarpa POPTR_0017s13610 I 0.850
PRUPE_ppa003436mg Prunus persica PRUPE_ppa003436mg I 0.903
PRUPE_ppa008387mg Prunus persica PRUPE_ppa008387mg I 0.883
PRUPE_ppa008856mg Prunus persica PRUPE_ppa008856mg I 0.852
SapurV1A.0060s0510 Salix purpurea SapurV1A.0060s0510 I 0.880
SapurV1A.0084s0570 Salix purpurea SapurV1A.0084s0570 I 0.883
SapurV1A.0178s0150 Salix purpurea SapurV1A.0178s0150 I 0.903
SapurV1A.0274s0040 Salix purpurea SapurV1A.0274s0040 I 0.852
SapurV1A.0868s0010 Salix purpurea SapurV1A.0868s0010 I 0.903
SapurV1A.2517s0020 Salix purpurea SapurV1A.2517s0020 I 0.852
Sb02g027460 Sorghum bicolor Sb02g027460 I 0.874
Sb04g029270 Sorghum bicolor Sb04g029270 I 0.865
Sb07g028860 Sorghum bicolor Sb07g028860 I 0.870
SELMODRAFT_451475 Selaginella moellendorffii SELMODRAFT_451475 I 0.901
SELMODRAFT_451477 Selaginella moellendorffii SELMODRAFT_451477 I 0.901
Si013622m.g Setaria italica Si013622m.g I 0.870
Si016505m.g Setaria italica Si016505m.g I 0.865
Si029604m.g Setaria italica Si029604m.g I 0.874
Solyc03g114720.2 Solanum lycopersicum Solyc03g114720.2 I 0.873
Solyc04g005280.2 Solanum lycopersicum Solyc04g005280.2 I 0.883
Solyc05g011810.2 Solanum lycopersicum Solyc05g011810.2 I 0.883
Solyc06g069370.2 Solanum lycopersicum Solyc06g069370.2 I 0.903
TCM_011433 Theobroma cacao TCM_011433 I 0.852
TCM_014392 Theobroma cacao TCM_014392 I 0.903
TCM_019015 Theobroma cacao TCM_019015 I 0.852
Thhalv10013181m.g Eutrema salsugineum Thhalv10013181m.g I 0.873
Thhalv10018889m.g Eutrema salsugineum Thhalv10018889m.g I 0.852
Thhalv10027863m.g Eutrema salsugineum Thhalv10027863m.g I 0.852
Traes_5AL_0D4BDDDCD Triticum aestivum Traes_5AL_0D4BDDDCD I 0.874
Traes_5BL_AAC9C7238 Triticum aestivum Traes_5BL_AAC9C7238 I 0.874
Traes_5DL_E96693018 Triticum aestivum Traes_5DL_E96693018 I 0.874