PGSC0003DMG400014432 (Solanum tuberosum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 PGSC0003DMG400014432 T043459_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH34
M01704_2.00 		Arabidopsis thaliana
VCACGYGH
DCRCGTGB		 PBM
Weirauch et al.(2014)
pTH7212 		0.876 0.750
BHLH34
M06734_2.00 		Arabidopsis thaliana
NNNHNNDNNNNVCACGTGHCN
NGDCACGTGBNNNNHNNDNNN		 Dap-seq
OMalley et al.(2016)
bHLH34_colamp_a 		0.876 0.750
BHLH34
M06735_2.00 		Arabidopsis thaliana
RWRNNNNNCACGTGBNNNNNNNN
NNNNNNNNVCACGTGNNNNNYWY		 Dap-seq
OMalley et al.(2016)
bHLH34_col 		0.876 0.750
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400037405 bHLH 73 124

Links

Other bHLH family TFs
Other Solanum tuberosum TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.000
BGIOSGA018253 Oryza indica BGIOSGA018253 I 0.000
Bo9g177130 Brassica oleracea Bo9g177130 I 0.000
BRADI2G29960 Brachypodium distachyon BRADI2G29960 I 0.000
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.000
F775_32062 Aegilops tauschii F775_32062 I 0.000
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.000
GLYMA12G11150 Glycine max GLYMA12G11150 I 0.000
GLYMA12G32400 Glycine max GLYMA12G32400 I 0.000
GLYMA13G38030 Glycine max GLYMA13G38030 I 0.000
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.000
LPERR05G09930 Leersia perrieri LPERR05G09930 I 0.000
MLOC_77405 Hordeum vulgare MLOC_77405 I 0.000
OB05G20700 Oryza brachyantha OB05G20700 I 0.000
OBART05G12580 Oryza barthii OBART05G12580 I 0.000
OLONG_017780 Oryza longistaminata OLONG_017780 I 0.000
OMERI05G11290 Oryza meridionalis OMERI05G11290 I 0.000
ONIVA05G13030 Oryza nivara ONIVA05G13030 I 0.000
OPUNC05G10700 Oryza punctata OPUNC05G10700 I 0.000
ORGLA05G0107600 Oryza glaberrima ORGLA05G0107600 I 0.000
ORUFI05G13560 Oryza rufipogon ORUFI05G13560 I 0.000
PK07402.1 Cannabis sativa PK07402.1 D 0.000
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.000
Q84JE9_HORVU Hordeum vulgare Q84JE9_HORVU D 0.000
Q84ND8_HORVU Hordeum vulgare Q84ND8_HORVU D 0.000
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.000
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.000
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.000
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.000
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.000
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.000
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.000