Cla001685 (Citrullus lanatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cla001685 T046927_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18401.1
M01126_2.00 		Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN		 PBM
Lambert et al.(2019)
pTH11272 		0.860 0.843
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla001685 bHLH 61 111

Links

Other bHLH family TFs
Other Citrullus lanatus TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29711.m000322 Ricinus communis 29711.m000322 I 0.860
29830.m001386 Ricinus communis 29830.m001386 I 0.864
AMTR_s00041p00193340 Amborella trichopoda AMTR_s00041p00193340 I 0.864
AMTR_s00070p00188780 Amborella trichopoda AMTR_s00070p00188780 I 0.852
BGIOSGA008112 Oryza indica BGIOSGA008112 I 0.851
bHLH11 Vitis vinifera VIT_04s0023g03430 I 0.860
bHLH121 Vitis vinifera VIT_03s0038g01790 I 0.864
cassava24935.valid.m1 Manihot esculenta cassava24935.valid.m1 I 0.860
cassava24936.valid.m1 Manihot esculenta cassava24936.valid.m1 I 0.860
Ciclev10028783m.g Citrus clementina Ciclev10028783m.g I 0.849
Cla014511 Citrullus lanatus Cla014511 I 0.860
Cucsa.043580 Cucumis sativus Cucsa.043580 I 0.860
Cucsa.169240 Cucumis sativus Cucsa.169240 I 0.888
Eucgr.G01757 Eucalyptus grandis Eucgr.G01757 I 0.849
Eucgr.I02346 Eucalyptus grandis Eucgr.I02346 I 0.860
GLYMA08G15740 Glycine max GLYMA08G15740 I 0.864
GLYMA12G02740 Glycine max GLYMA12G02740 I 0.842
GLYMA15G29630 Glycine max GLYMA15G29630 I 0.839
Gorai.005G252200 Gossypium raimondii Gorai.005G252200 I 0.860
GSMUA_Achr11G16630_001 Musa acuminata GSMUA_Achr11G16630_001 I 0.864
Lus10028456.g Linum usitatissimum Lus10028456.g I 0.864
Lus10041908.g Linum usitatissimum Lus10041908.g I 0.864
MDP0000275844 Malus domestica MDP0000275844 I 0.864
mgf017107m Mimulus guttatus mgf017107m I 0.864
OPUNC02G13570 Oryza punctata OPUNC02G13570 I 0.851
orange1.1g022288m.g Citrus sinensis orange1.1g022288m.g I 0.849
OS02G0433600 Oryza sativa OS02G0433600 I 0.851
PGSC0003DMG400001594 Solanum tuberosum PGSC0003DMG400001594 I 0.852
PK18401.1 Cannabis sativa PK18401.1 D 0.860
Pm021043 Prunus mume Pm021043 I 0.864
Pm026758 Prunus mume Pm026758 I 0.860
POPTR_0004s17540 Populus trichocarpa POPTR_0004s17540 I 0.860
PRUPE_ppa008347mg Prunus persica PRUPE_ppa008347mg I 0.864
PRUPE_ppa008596mg Prunus persica PRUPE_ppa008596mg I 0.860
SapurV1A.0117s0370 Salix purpurea SapurV1A.0117s0370 I 0.848
Solyc01g111130.2 Solanum lycopersicum Solyc01g111130.2 I 0.852
TCM_000204 Theobroma cacao TCM_000204 I 0.864
TCM_006692 Theobroma cacao TCM_006692 I 0.849