orange1.1g022288m.g (Citrus sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 orange1.1g022288m.g T050565_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18401.1
M01126_2.00 		Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN		 PBM
Lambert et al.(2019)
pTH11272 		0.903 0.882
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g022288m bHLH 18 68

Links

Other bHLH family TFs
Other Citrus sinensis TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10028783m.g Citrus clementina Ciclev10028783m.g I 0.914
Eucgr.G01757 Eucalyptus grandis Eucgr.G01757 I 0.914
AMTR_s00070p00188780 Amborella trichopoda AMTR_s00070p00188780 I 0.911
POPTR_0004s17540 Populus trichocarpa POPTR_0004s17540 I 0.903
PRUPE_ppa008596mg Prunus persica PRUPE_ppa008596mg I 0.903
TCM_006692 Theobroma cacao TCM_006692 I 0.903
bHLH11 Vitis vinifera VIT_04s0023g03430 I 0.903
Cla014511 Citrullus lanatus Cla014511 I 0.903
Pm026758 Prunus mume Pm026758 I 0.903
29711.m000322 Ricinus communis 29711.m000322 I 0.903
cassava24935.valid.m1 Manihot esculenta cassava24935.valid.m1 I 0.903
cassava24936.valid.m1 Manihot esculenta cassava24936.valid.m1 I 0.903
Cucsa.043580 Cucumis sativus Cucsa.043580 I 0.903
Eucgr.I02346 Eucalyptus grandis Eucgr.I02346 I 0.903
Gorai.005G252200 Gossypium raimondii Gorai.005G252200 I 0.903
PK18401.1 Cannabis sativa PK18401.1 D 0.903
SapurV1A.1150s0140 Salix purpurea SapurV1A.1150s0140 I 0.902
AMTR_s00041p00193340 Amborella trichopoda AMTR_s00041p00193340 I 0.900
GLYMA08G15740 Glycine max GLYMA08G15740 I 0.900
GSMUA_Achr11G16630_001 Musa acuminata GSMUA_Achr11G16630_001 I 0.900
PRUPE_ppa008347mg Prunus persica PRUPE_ppa008347mg I 0.900
TCM_000204 Theobroma cacao TCM_000204 I 0.900
bHLH121 Vitis vinifera VIT_03s0038g01790 I 0.900
Pm021043 Prunus mume Pm021043 I 0.900
29830.m001386 Ricinus communis 29830.m001386 I 0.900
Lus10028456.g Linum usitatissimum Lus10028456.g I 0.900
Lus10041908.g Linum usitatissimum Lus10041908.g I 0.900
MDP0000275844 Malus domestica MDP0000275844 I 0.900
GLYMA07G26910 Glycine max GLYMA07G26910 I 0.893
POPTR_0009s13220 Populus trichocarpa POPTR_0009s13220 I 0.890
SapurV1A.0117s0370 Salix purpurea SapurV1A.0117s0370 I 0.890
BGIOSGA008112 Oryza indica BGIOSGA008112 I 0.887
MTR_4g075480 Medicago truncatula MTR_4g075480 I 0.887
OPUNC02G13570 Oryza punctata OPUNC02G13570 I 0.887
OS02G0433600 Oryza sativa OS02G0433600 I 0.887
estExt_fgenesh1_pg.C_1360017 Physcomitrella patens estExt_fgenesh1_pg.C_1360017 I 0.887
fgenesh1_pg.scaffold_31000088 Physcomitrella patens fgenesh1_pg.scaffold_31000088 I 0.887
PGSC0003DMG400001594 Solanum tuberosum PGSC0003DMG400001594 I 0.885
Solyc01g111130.2 Solanum lycopersicum Solyc01g111130.2 I 0.885
gene07391-v1.0-hybrid Fragaria vesca gene07391-v1.0-hybrid I 0.879
GLYMA12G02740 Glycine max GLYMA12G02740 I 0.878
Cucsa.169240 Cucumis sativus Cucsa.169240 I 0.876
GLYMA15G29630 Glycine max GLYMA15G29630 I 0.875
mgf017107m Mimulus guttatus mgf017107m I 0.873
gene14608-v1.0-hybrid Fragaria vesca gene14608-v1.0-hybrid I 0.868
POPTR_0005s11550 Populus trichocarpa POPTR_0005s11550 I 0.865
evm.TU.supercontig_6.255 Carica papaya evm.TU.supercontig_6.255 I 0.865
BHLH121 Arabidopsis thaliana AT3G19860 I 0.855
bHLH121 Arabidopsis lyrata fgenesh2_kg.3__2204__AT3G19860.1 I 0.855
Bostr.19424s0675 Boechera stricta Bostr.19424s0675 I 0.855
Cagra.0316s0082 Capsella grandiflora Cagra.0316s0082 I 0.855
Thhalv10021271m.g Eutrema salsugineum Thhalv10021271m.g I 0.855
Thhalv10023630m.g Eutrema salsugineum Thhalv10023630m.g I 0.855
GRMZM2G114444 Zea mays GRMZM2G114444 I 0.852
LPERR02G12290 Leersia perrieri LPERR02G12290 I 0.852
OB0197G10010 Oryza brachyantha OB0197G10010 I 0.852
Sb03g028030 Sorghum bicolor Sb03g028030 I 0.852
Si017804m.g Setaria italica Si017804m.g I 0.852
Pavir.Aa02015 Panicum virgatum Pavir.Aa02015 I 0.852
Cla001685 Citrullus lanatus Cla001685 I 0.849
Ciclev10016381m.g Citrus clementina Ciclev10016381m.g N 0.846
orange1.1g026646m.g Citrus sinensis orange1.1g026646m.g N 0.846
Bo1g112310 Brassica oleracea Bo1g112310 I 0.844
Bra038236 Brassica rapa Bra038236 I 0.844
evm.TU.supercontig_17.155 Carica papaya evm.TU.supercontig_17.155 I 0.843