Thhalv10021271m.g (Eutrema salsugineum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Thhalv10021271m.g T051268_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18401.1
M01126_2.00 		Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN		 PBM
Lambert et al.(2019)
pTH11272 		0.844 0.843
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10021271m bHLH 6 56
Thhalv10021282m bHLH 6 54

Links

Other bHLH family TFs
Other Eutrema salsugineum TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH121 Arabidopsis thaliana AT3G19860 I 0.914
bHLH121 Arabidopsis lyrata fgenesh2_kg.3__2204__AT3G19860.1 I 0.914
Bostr.19424s0675 Boechera stricta Bostr.19424s0675 I 0.914
Cagra.0316s0082 Capsella grandiflora Cagra.0316s0082 I 0.914
Thhalv10023630m.g Eutrema salsugineum Thhalv10023630m.g I 0.914
Bo1g112310 Brassica oleracea Bo1g112310 I 0.903
Bra038236 Brassica rapa Bra038236 I 0.903
gene14608-v1.0-hybrid Fragaria vesca gene14608-v1.0-hybrid I 0.879
GRMZM2G114444 Zea mays GRMZM2G114444 I 0.863
LPERR02G12290 Leersia perrieri LPERR02G12290 I 0.863
OB0197G10010 Oryza brachyantha OB0197G10010 I 0.863
Sb03g028030 Sorghum bicolor Sb03g028030 I 0.863
Si017804m.g Setaria italica Si017804m.g I 0.863
Pavir.Aa02015 Panicum virgatum Pavir.Aa02015 I 0.863
Ciclev10028783m.g Citrus clementina Ciclev10028783m.g I 0.855
Eucgr.G01757 Eucalyptus grandis Eucgr.G01757 I 0.855
orange1.1g022288m.g Citrus sinensis orange1.1g022288m.g I 0.855
AMTR_s00070p00188780 Amborella trichopoda AMTR_s00070p00188780 I 0.852
POPTR_0004s17540 Populus trichocarpa POPTR_0004s17540 I 0.844
PRUPE_ppa008596mg Prunus persica PRUPE_ppa008596mg I 0.844
TCM_006692 Theobroma cacao TCM_006692 I 0.844
bHLH11 Vitis vinifera VIT_04s0023g03430 I 0.844
Cla014511 Citrullus lanatus Cla014511 I 0.844
Pm026758 Prunus mume Pm026758 I 0.844
29711.m000322 Ricinus communis 29711.m000322 I 0.844
cassava24935.valid.m1 Manihot esculenta cassava24935.valid.m1 I 0.844
cassava24936.valid.m1 Manihot esculenta cassava24936.valid.m1 I 0.844
Cucsa.043580 Cucumis sativus Cucsa.043580 I 0.844
Eucgr.I02346 Eucalyptus grandis Eucgr.I02346 I 0.844
Gorai.005G252200 Gossypium raimondii Gorai.005G252200 I 0.844
PK18401.1 Cannabis sativa PK18401.1 D 0.844
SapurV1A.1150s0140 Salix purpurea SapurV1A.1150s0140 I 0.842
AMTR_s00041p00193340 Amborella trichopoda AMTR_s00041p00193340 I 0.840
GLYMA08G15740 Glycine max GLYMA08G15740 I 0.840
GSMUA_Achr11G16630_001 Musa acuminata GSMUA_Achr11G16630_001 I 0.840
POPTR_0005s11550 Populus trichocarpa POPTR_0005s11550 I 0.840
PRUPE_ppa008347mg Prunus persica PRUPE_ppa008347mg I 0.840
TCM_000204 Theobroma cacao TCM_000204 I 0.840
bHLH121 Vitis vinifera VIT_03s0038g01790 I 0.840
Pm021043 Prunus mume Pm021043 I 0.840
29830.m001386 Ricinus communis 29830.m001386 I 0.840
Cucsa.169240 Cucumis sativus Cucsa.169240 I 0.840
evm.TU.supercontig_6.255 Carica papaya evm.TU.supercontig_6.255 I 0.840
Lus10028456.g Linum usitatissimum Lus10028456.g I 0.840
Lus10041908.g Linum usitatissimum Lus10041908.g I 0.840
MDP0000275844 Malus domestica MDP0000275844 I 0.840
BRADI3G11520 Brachypodium distachyon BRADI3G11520 I 0.839
Pavir.Ab01730 Panicum virgatum Pavir.Ab01730 I 0.839