CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_05782
(
Verticillium albo atrum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
VDBG_05782
T056308_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_00951
M01791_2.00
Aspergillus nidulans
NNNNMCGHN
NDCGKNNNN
PBM
Weirauch et al.(2014)
pTH8230
0.829
0.750
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_05782T0
bZIP
288
351
KKLSSKERRQLRNKVSARAFRSRRKEYITQLEAEIANKVTENGDLRLQNHALMEENKRLSDLTR
Links
Other
bZIP
family TFs
Other
Verticillium albo atrum
TFs
116 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27763.m000042
Ricinus communis
27763.m000042
I
ATMYB90
Arabidopsis lyrata
scaffold_201358.1
I
Bo00835s060
Brassica oleracea
Bo00835s060
I
Bo6g099880
Brassica oleracea
Bo6g099880
I
Bo6g100940
Brassica oleracea
Bo6g100940
I
Bostr.26959s0279
Boechera stricta
Bostr.26959s0279
I
Bra001917
Brassica rapa
Bra001917
I
Bra004162
Brassica rapa
Bra004162
I
Bra039763
Brassica rapa
Bra039763
I
Cagra.0463s0006
Capsella grandiflora
Cagra.0463s0006
I
Cagra.0463s0007
Capsella grandiflora
Cagra.0463s0007
I
Cagra.2400s0001
Capsella grandiflora
Cagra.2400s0001
I
Cagra.2629s0007
Capsella grandiflora
Cagra.2629s0007
I
Carubv10020856m.g
Capsella rubella
Carubv10020856m.g
I
Ca_19630
Cicer arietinum
Ca_19630
I
Ca_22078
Cicer arietinum
Ca_22078
I
chr1.CM0141.350.nd
Lotus japonicus
chr1.CM0141.350.nd
I
Ciclev10013455m.g
Citrus clementina
Ciclev10013455m.g
I
Eucgr.H04157
Eucalyptus grandis
Eucgr.H04157
I
evm.TU.supercontig_116.38
Carica papaya
evm.TU.supercontig_116.38
I
evm.TU.supercontig_2742.1
Carica papaya
evm.TU.supercontig_2742.1
I
evm.TU.supercontig_51.67
Carica papaya
evm.TU.supercontig_51.67
I
gene31413-v1.0-hybrid
Fragaria vesca
gene31413-v1.0-hybrid
I
GLYMA07G16980
Glycine max
GLYMA07G16980
I
GLYMA09G36966
Glycine max
GLYMA09G36966
I
GLYMA18G41520
Glycine max
GLYMA18G41520
I
GLYMA18G49690
Glycine max
GLYMA18G49690
I
Gorai.001G087200
Gossypium raimondii
Gorai.001G087200
I
Gorai.001G087400
Gossypium raimondii
Gorai.001G087400
I
Gorai.007G268800
Gossypium raimondii
Gorai.007G268800
I
Gorai.013G118300
Gossypium raimondii
Gorai.013G118300
I
Lus10009129.g
Linum usitatissimum
Lus10009129.g
I
Lus10028514.g
Linum usitatissimum
Lus10028514.g
I
Lus10042522.g
Linum usitatissimum
Lus10042522.g
I
MDP0000192051
Malus domestica
MDP0000192051
I
mgf019317m
Mimulus guttatus
mgf019317m
I
MTR_0001s0360
Medicago truncatula
MTR_0001s0360
I
MTR_0197s0010
Medicago truncatula
MTR_0197s0010
I
MTR_5g078860
Medicago truncatula
MTR_5g078860
I
MTR_5g078910
Medicago truncatula
MTR_5g078910
I
MTR_5g078950
Medicago truncatula
MTR_5g078950
I
MTR_5g079120
Medicago truncatula
MTR_5g079120
I
MTR_5g079220
Medicago truncatula
MTR_5g079220
I
MTR_5g079290
Medicago truncatula
MTR_5g079290
I
MTR_8g060940
Medicago truncatula
MTR_8g060940
I
MYB113
Arabidopsis thaliana
AT1G66370
D
MYB113
Arabidopsis lyrata
fgenesh2_kg.2__869__AT1G66370.1
I
MYB114
Arabidopsis thaliana
AT1G66380
I
MYB75
Arabidopsis thaliana
AT1G56650
I
MYB90
Arabidopsis thaliana
AT1G66390
I
PAP1
Arabidopsis lyrata
fgenesh2_kg.1__4777__AT1G56650.1
I
PK05760.1
Cannabis sativa
PK05760.1
I
PK17827.1
Cannabis sativa
PK17827.1
I
Pm029440
Prunus mume
Pm029440
I
Pm029442
Prunus mume
Pm029442
I
Pm029445
Prunus mume
Pm029445
I
PRUPE_ppa010069mg
Prunus persica
PRUPE_ppa010069mg
I
PRUPE_ppa016711mg
Prunus persica
PRUPE_ppa016711mg
I
PRUPE_ppa020385mg
Prunus persica
PRUPE_ppa020385mg
I
PRUPE_ppa026640mg
Prunus persica
PRUPE_ppa026640mg
I
scaffold_201357.1
Arabidopsis lyrata
scaffold_201357.1
I
Solyc10g086250.1
Solanum lycopersicum
Solyc10g086250.1
I
Solyc10g086260.1
Solanum lycopersicum
Solyc10g086260.1
I
Solyc10g086270.1
Solanum lycopersicum
Solyc10g086270.1
I
Solyc10g086290.1
Solanum lycopersicum
Solyc10g086290.1
I
TCM_019192
Theobroma cacao
TCM_019192
I
TCM_026054
Theobroma cacao
TCM_026054
I
Thhalv10019041m.g
Eutrema salsugineum
Thhalv10019041m.g
I
VIT_02s0033g00410
Vitis vinifera
VIT_02s0033g00410
I
VIT_02s0033g00450
Vitis vinifera
VIT_02s0033g00450
I
VIT_14s0006g01290
Vitis vinifera
VIT_14s0006g01290
I