Pavir.Bb03755 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Bb03755 T072339_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP18
M01777_2.00 		Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN		 PBM
Weirauch et al.(2014)
pTH7316 		0.844 0.951
BZIP18
M06768_2.00 		Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a 		0.844 0.951
BZIP18
M06769_2.00 		Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP18_col_v31 		0.844 0.951
PK00315.1
M01153_2.00 		Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN		 PBM
Lambert et al.(2019)
pTH10085 		0.833 0.967
PK16335.1
M01157_2.00 		Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN		 PBM
Lambert et al.(2019)
pTH10187 		0.833 0.951
AtbZIP52
M06746_2.00 		Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a 		0.819 0.885
AtbZIP52
M06747_2.00 		Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_col_v31 		0.819 0.885
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb03755.1.p bZIP 159 219

Links

Other bZIP family TFs
Other Panicum virgatum TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29709.m001180 Ricinus communis 29709.m001180 N 0.000
Aquca_010_00154 Aquilegia coerulea Aquca_010_00154 N 0.000
AT2G44730 Arabidopsis thaliana AT2G44730 N 0.000
Bo4g023990 Brassica oleracea Bo4g023990 N 0.000
Bostr.25993s0300 Boechera stricta Bostr.25993s0300 N 0.000
Bra000360 Brassica rapa Bra000360 N 0.000
Bra004859 Brassica rapa Bra004859 N 0.000
Cagra.0239s0022 Capsella grandiflora Cagra.0239s0022 N 0.000
Carubv10025047m.g Capsella rubella Carubv10025047m.g N 0.000
cassava12982.valid.m1 Manihot esculenta cassava12982.valid.m1 N 0.000
Ca_06067 Cicer arietinum Ca_06067 N 0.000
Ca_06795 Cicer arietinum Ca_06795 N 0.000
chr4.CM0739.40.nd Lotus japonicus chr4.CM0739.40.nd N 0.000
Ciclev10020863m.g Citrus clementina Ciclev10020863m.g N 0.000
Cla021714 Citrullus lanatus Cla021714 N 0.000
Cucsa.078220 Cucumis sativus Cucsa.078220 N 0.000
Cucsa.256710 Cucumis sativus Cucsa.256710 N 0.000
evm.TU.supercontig_41.83 Carica papaya evm.TU.supercontig_41.83 N 0.000
fgenesh2_kg.4__2662__AT2G44730.1 Arabidopsis lyrata fgenesh2_kg.4__2662__AT2G44730.1 N 0.000
gene05318-v1.0-hybrid Fragaria vesca gene05318-v1.0-hybrid N 0.000
GLYMA08G05630 Glycine max GLYMA08G05630 N 0.000
GLYMA09G38050 Glycine max GLYMA09G38050 N 0.000
GLYMA18G48343 Glycine max GLYMA18G48343 N 0.000
Gorai.001G233700 Gossypium raimondii Gorai.001G233700 N 0.000
Gorai.004G167100 Gossypium raimondii Gorai.004G167100 N 0.000
GRMZM2G379179 Zea mays GRMZM2G379179 N 0.000
GRMZM5G850092 Zea mays GRMZM5G850092 N 0.000
MDP0000557282 Malus domestica MDP0000557282 N 0.000
mgf005560m Mimulus guttatus mgf005560m N 0.000
MTR_4g117990 Medicago truncatula MTR_4g117990 N 0.000
orange1.1g018620m.g Citrus sinensis orange1.1g018620m.g N 0.000
PK17306.1 Cannabis sativa PK17306.1 N 0.000
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N 0.000
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N 0.000
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N 0.000
TCM_005773 Theobroma cacao TCM_005773 N 0.000
Thhalv10001488m.g Eutrema salsugineum Thhalv10001488m.g N 0.000
VIT_15s0021g01220 Vitis vinifera VIT_15s0021g01220 N 0.000