Pavir.Fb01750 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Fb01750 T072395_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.823 0.787
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.817 0.803
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.817 0.803
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.816 0.770
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.816 0.770
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.816 0.770
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.813 0.639
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.813 0.639
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.804 0.656
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.804 0.656
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.804 0.656
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.804 0.656
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.804 0.656
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.804 0.656
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.800 0.721
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fb01750.1.p bZIP 139 199

Links

Other bZIP family TFs
Other Panicum virgatum TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30115.m001220 Ricinus communis 30115.m001220 N
30136.m001043 Ricinus communis 30136.m001043 N
30146.m003443 Ricinus communis 30146.m003443 N
30170.m013861 Ricinus communis 30170.m013861 N
AMTR_s00008p00265010 Amborella trichopoda AMTR_s00008p00265010 N
AMTR_s00071p00111940 Amborella trichopoda AMTR_s00071p00111940 N
Aquca_001_00189 Aquilegia coerulea Aquca_001_00189 N
Aquca_007_00665 Aquilegia coerulea Aquca_007_00665 N
Aquca_010_00306 Aquilegia coerulea Aquca_010_00306 N
Aquca_022_00317 Aquilegia coerulea Aquca_022_00317 N
BGIOSGA001389 Oryza indica BGIOSGA001389 N
BGIOSGA026828 Oryza indica BGIOSGA026828 N
BGIOSGA027780 Oryza indica BGIOSGA027780 N
BGIOSGA030896 Oryza indica BGIOSGA030896 N
BHLH87 Arabidopsis thaliana AT3G21330 N
Bo1g084640 Brassica oleracea Bo1g084640 N
Bo2g009510 Brassica oleracea Bo2g009510 N
Bo2g167880 Brassica oleracea Bo2g167880 N
Bo3g054830 Brassica oleracea Bo3g054830 N
Bo3g078540 Brassica oleracea Bo3g078540 N
Bo5g101160 Brassica oleracea Bo5g101160 N
Bo7g064100 Brassica oleracea Bo7g064100 N
Bo8g079710 Brassica oleracea Bo8g079710 N
Bo9g020420 Brassica oleracea Bo9g020420 N
Bo9g173860 Brassica oleracea Bo9g173860 N
Bostr.0568s0128 Boechera stricta Bostr.0568s0128 N
Bostr.13129s0018 Boechera stricta Bostr.13129s0018 N
Bostr.14547s0021 Boechera stricta Bostr.14547s0021 N
Bostr.19424s0519 Boechera stricta Bostr.19424s0519 N
Bostr.6864s0212 Boechera stricta Bostr.6864s0212 N
Bra000979 Brassica rapa Bra000979 N
Bra001826 Brassica rapa Bra001826 N
Bra012128 Brassica rapa Bra012128 N
Bra028620 Brassica rapa Bra028620 N
Bra030002 Brassica rapa Bra030002 N
Bra031275 Brassica rapa Bra031275 N
Bra036071 Brassica rapa Bra036071 N
Bra036801 Brassica rapa Bra036801 N
Bra037128 Brassica rapa Bra037128 N
BRADI2G41390 Brachypodium distachyon BRADI2G41390 N
BRADI3G13300 Brachypodium distachyon BRADI3G13300 N
BRADI3G38250 Brachypodium distachyon BRADI3G38250 N
BRADI4G32060 Brachypodium distachyon BRADI4G32060 N
Cagra.0706s0009 Capsella grandiflora Cagra.0706s0009 N
Cagra.1085s0086 Capsella grandiflora Cagra.1085s0086 N
Cagra.1261s0004 Capsella grandiflora Cagra.1261s0004 N
Cagra.1757s0024 Capsella grandiflora Cagra.1757s0024 N
Cagra.2428s0003 Capsella grandiflora Cagra.2428s0003 N
Carubv10003163m.g Capsella rubella Carubv10003163m.g N
Carubv10003900m.g Capsella rubella Carubv10003900m.g N
Carubv10013989m.g Capsella rubella Carubv10013989m.g N
Carubv10019056m.g Capsella rubella Carubv10019056m.g N
Carubv10027898m.g Capsella rubella Carubv10027898m.g N
cassava15224.m1 Manihot esculenta cassava15224.m1 N
cassava2779.m1 Manihot esculenta cassava2779.m1 N
cassava34914.m1 Manihot esculenta cassava34914.m1 N
cassava41909.m1 Manihot esculenta cassava41909.m1 N
cassava45275.m1 Manihot esculenta cassava45275.m1 N
cassava5871.m1 Manihot esculenta cassava5871.m1 N
cassava8495.m1 Manihot esculenta cassava8495.m1 N
Ca_01550 Cicer arietinum Ca_01550 N
Ca_02154 Cicer arietinum Ca_02154 N
Ca_02767 Cicer arietinum Ca_02767 N
Ca_09282 Cicer arietinum Ca_09282 N
Ca_09667 Cicer arietinum Ca_09667 N
Ca_10121 Cicer arietinum Ca_10121 N
Ciclev10003815m.g Citrus clementina Ciclev10003815m.g N
Ciclev10026967m.g Citrus clementina Ciclev10026967m.g N
Ciclev10026976m.g Citrus clementina Ciclev10026976m.g N
Cla008578 Citrullus lanatus Cla008578 N
Cla015855 Citrullus lanatus Cla015855 N
Cla020973 Citrullus lanatus Cla020973 N
Cla022928 Citrullus lanatus Cla022928 N
Cucsa.101020 Cucumis sativus Cucsa.101020 N
Cucsa.352300 Cucumis sativus Cucsa.352300 N
Cucsa.360770 Cucumis sativus Cucsa.360770 N
Cucsa.396050 Cucumis sativus Cucsa.396050 N
Eucgr.F00216 Eucalyptus grandis Eucgr.F00216 N
Eucgr.H01682 Eucalyptus grandis Eucgr.H01682 N
Eucgr.H02048 Eucalyptus grandis Eucgr.H02048 N
Eucgr.H04946 Eucalyptus grandis Eucgr.H04946 N
evm.TU.supercontig_131.7 Carica papaya evm.TU.supercontig_131.7 N
evm.TU.supercontig_49.31 Carica papaya evm.TU.supercontig_49.31 N
evm.TU.supercontig_55.142 Carica papaya evm.TU.supercontig_55.142 N
F775_04427 Aegilops tauschii F775_04427 N
F775_52433 Aegilops tauschii F775_52433 N
fgenesh1_pg.scaffold_4000051 Physcomitrella patens fgenesh1_pg.scaffold_4000051 N
fgenesh2_kg.3__2354__AT3G21330.1 Arabidopsis lyrata fgenesh2_kg.3__2354__AT3G21330.1 N
gene09115-v1.0-hybrid Fragaria vesca gene09115-v1.0-hybrid N
gene17881-v1.0-hybrid Fragaria vesca gene17881-v1.0-hybrid N
gene22897-v1.0-hybrid Fragaria vesca gene22897-v1.0-hybrid N
gene23830-v1.0-hybrid Fragaria vesca gene23830-v1.0-hybrid N
GLYMA01G39360 Glycine max GLYMA01G39360 N
GLYMA04G04190 Glycine max GLYMA04G04190 N
GLYMA04G39210 Glycine max GLYMA04G39210 N
GLYMA05G19920 Glycine max GLYMA05G19920 N
GLYMA05G32410 Glycine max GLYMA05G32410 N
GLYMA06G04380 Glycine max GLYMA06G04380 N
GLYMA06G15730 Glycine max GLYMA06G15730 N
GLYMA07G01611 Glycine max GLYMA07G01611 N
GLYMA08G16570 Glycine max GLYMA08G16570 N
GLYMA08G21130 Glycine max GLYMA08G21130 N
GLYMA11G05920 Glycine max GLYMA11G05920 N
GLYMA13G42900 Glycine max GLYMA13G42900 N
GLYMA15G02531 Glycine max GLYMA15G02531 N
GLYMA17G19830 Glycine max GLYMA17G19830 N
Gorai.003G025300 Gossypium raimondii Gorai.003G025300 N
Gorai.003G060900 Gossypium raimondii Gorai.003G060900 N
Gorai.007G213700 Gossypium raimondii Gorai.007G213700 N
Gorai.009G212900 Gossypium raimondii Gorai.009G212900 N
Gorai.010G020500 Gossypium raimondii Gorai.010G020500 N
Gorai.011G069200 Gossypium raimondii Gorai.011G069200 N
Gorai.011G116100 Gossypium raimondii Gorai.011G116100 N
GRMZM2G111666 Zea mays GRMZM2G111666 N
GRMZM2G134735 Zea mays GRMZM2G134735 N
GRMZM2G164341 Zea mays GRMZM2G164341 N
GRMZM2G414252 Zea mays GRMZM2G414252 N
GRMZM2G471635 Zea mays GRMZM2G471635 N
GSMUA_Achr10G25590_001 Musa acuminata GSMUA_Achr10G25590_001 N
GSMUA_Achr5G01290_001 Musa acuminata GSMUA_Achr5G01290_001 N
GSMUA_Achr6G18580_001 Musa acuminata GSMUA_Achr6G18580_001 N
GSMUA_Achr8G23350_001 Musa acuminata GSMUA_Achr8G23350_001 N
GSMUA_Achr8G24970_001 Musa acuminata GSMUA_Achr8G24970_001 N
gw1.57.119.1 Physcomitrella patens gw1.57.119.1 N
HEC1 Arabidopsis thaliana AT5G67060 N
HEC1 Arabidopsis lyrata fgenesh2_kg.8__2711__AT5G67060.1 N
HEC2 Arabidopsis thaliana AT3G50330 N
HEC2 Arabidopsis lyrata fgenesh2_kg.5__1376__AT3G50330.1 N
HEC3 Arabidopsis thaliana AT5G09750 N
HEC3 Arabidopsis lyrata fgenesh2_kg.6__929__AT5G09750.1 N
HEC3 Vitis vinifera VIT_04s0044g01040 N
IND Arabidopsis thaliana AT4G00120 N
IND1 Arabidopsis lyrata fgenesh2_kg.6__3690__AT4G00120.1 N
LjSGA_011209.1 Lotus japonicus LjSGA_011209.1 N
LjT10C23.20.nc Lotus japonicus LjT10C23.20.nc N
LPERR01G17090 Leersia perrieri LPERR01G17090 N
LPERR08G01030 Leersia perrieri LPERR08G01030 N
LPERR08G14680 Leersia perrieri LPERR08G14680 N
LPERR09G09120 Leersia perrieri LPERR09G09120 N
Lus10003500.g Linum usitatissimum Lus10003500.g N
Lus10005710.g Linum usitatissimum Lus10005710.g N
Lus10009745.g Linum usitatissimum Lus10009745.g N
Lus10012670.g Linum usitatissimum Lus10012670.g N
Lus10042647.g Linum usitatissimum Lus10042647.g N
MDP0000123893 Malus domestica MDP0000123893 N
MDP0000123894 Malus domestica MDP0000123894 N
MDP0000145937 Malus domestica MDP0000145937 N
MDP0000166245 Malus domestica MDP0000166245 N
MDP0000249405 Malus domestica MDP0000249405 N
MDP0000420192 Malus domestica MDP0000420192 N
MDP0000711774 Malus domestica MDP0000711774 N
mg018414m Mimulus guttatus mg018414m N
mgf019142m Mimulus guttatus mgf019142m N
mgf023933m Mimulus guttatus mgf023933m N
MLOC_16429 Hordeum vulgare MLOC_16429 N
MTR_2g100490 Medicago truncatula MTR_2g100490 N
MTR_3g101810 Medicago truncatula MTR_3g101810 N
MTR_5g017210 Medicago truncatula MTR_5g017210 N
MTR_8g015450 Medicago truncatula MTR_8g015450 N
MTR_8g093500 Medicago truncatula MTR_8g093500 N
OB08G10720 Oryza brachyantha OB08G10720 N
OBART01G19850 Oryza barthii OBART01G19850 N
OGLUM01G23470 Oryza glumaepatula OGLUM01G23470 N
OGLUM08G00660 Oryza glumaepatula OGLUM08G00660 N
OGLUM08G18600 Oryza glumaepatula OGLUM08G18600 N
OGLUM09G13100 Oryza glumaepatula OGLUM09G13100 N
OMERI01G18460 Oryza meridionalis OMERI01G18460 N
OMERI08G00980 Oryza meridionalis OMERI08G00980 N
OMERI09G10060 Oryza meridionalis OMERI09G10060 N
ONIVA01G07440 Oryza nivara ONIVA01G07440 N
ONIVA03G20840 Oryza nivara ONIVA03G20840 N
ONIVA08G00590 Oryza nivara ONIVA08G00590 N
ONIVA08G19790 Oryza nivara ONIVA08G19790 N
OPUNC01G20250 Oryza punctata OPUNC01G20250 N
OPUNC08G00600 Oryza punctata OPUNC08G00600 N
OPUNC08G15570 Oryza punctata OPUNC08G15570 N
OPUNC09G11020 Oryza punctata OPUNC09G11020 N
orange1.1g020172m.g Citrus sinensis orange1.1g020172m.g N
orange1.1g024139m.g Citrus sinensis orange1.1g024139m.g N
orange1.1g043072m.g Citrus sinensis orange1.1g043072m.g N
orange1.1g047850m.g Citrus sinensis orange1.1g047850m.g N
ORGLA01G0163600 Oryza glaberrima ORGLA01G0163600 N
ORGLA08G0155700 Oryza glaberrima ORGLA08G0155700 N
ORGLA08G0237200 Oryza glaberrima ORGLA08G0237200 N
ORGLA09G0096500 Oryza glaberrima ORGLA09G0096500 N
ORUFI08G00650 Oryza rufipogon ORUFI08G00650 N
ORUFI08G19930 Oryza rufipogon ORUFI08G19930 N
ORUFI09G13650 Oryza rufipogon ORUFI09G13650 N
OS01G0566800 Oryza sativa OS01G0566800 N
OS08G0108500 Oryza sativa OS08G0108500 N
OS09G0455300 Oryza sativa OS09G0455300 N
Pavir.Ba02034 Panicum virgatum Pavir.Ba02034 N
Pavir.Ea01618 Panicum virgatum Pavir.Ea01618 N
Pavir.Eb02113 Panicum virgatum Pavir.Eb02113 N
Pavir.Eb02901 Panicum virgatum Pavir.Eb02901 N
Pavir.Fa00680 Panicum virgatum Pavir.Fa00680 N
Pavir.Fa02152 Panicum virgatum Pavir.Fa02152 N
Pavir.J20328 Panicum virgatum Pavir.J20328 N
Pavir.J21912 Panicum virgatum Pavir.J21912 N
Pavir.J39499 Panicum virgatum Pavir.J39499 N
PGSC0003DMG400004039 Solanum tuberosum PGSC0003DMG400004039 N
PGSC0003DMG400004875 Solanum tuberosum PGSC0003DMG400004875 N
PGSC0003DMG400007964 Solanum tuberosum PGSC0003DMG400007964 N
PGSC0003DMG400018986 Solanum tuberosum PGSC0003DMG400018986 N
PGSC0003DMG400028657 Solanum tuberosum PGSC0003DMG400028657 N
PK01043.1 Cannabis sativa PK01043.1 N
PK21140.1 Cannabis sativa PK21140.1 N
Pm001707 Prunus mume Pm001707 N
Pm005293 Prunus mume Pm005293 N
Pm026380 Prunus mume Pm026380 N
Pm030884 Prunus mume Pm030884 N
POPTR_0002s12660 Populus trichocarpa POPTR_0002s12660 N
POPTR_0005s06220 Populus trichocarpa POPTR_0005s06220 N
POPTR_0005s18210 Populus trichocarpa POPTR_0005s18210 N
POPTR_0014s02720 Populus trichocarpa POPTR_0014s02720 N
PRUPE_ppa015446mg Prunus persica PRUPE_ppa015446mg N
PRUPE_ppa021226mg Prunus persica PRUPE_ppa021226mg N
PRUPE_ppa021410mg Prunus persica PRUPE_ppa021410mg N
PRUPE_ppa022938mg Prunus persica PRUPE_ppa022938mg N
SapurV1A.0167s0080 Salix purpurea SapurV1A.0167s0080 N
SapurV1A.0352s0020 Salix purpurea SapurV1A.0352s0020 N
SapurV1A.0423s0010 Salix purpurea SapurV1A.0423s0010 N
SapurV1A.0550s0030 Salix purpurea SapurV1A.0550s0030 N
SapurV1A.2123s0040 Salix purpurea SapurV1A.2123s0040 N
Sb02g026530 Sorghum bicolor Sb02g026530 N
Sb03g025570 Sorghum bicolor Sb03g025570 N
Sb03g032520 Sorghum bicolor Sb03g032520 N
Sb07g000900 Sorghum bicolor Sb07g000900 N
Sb07g000910 Sorghum bicolor Sb07g000910 N
Sb07g022920 Sorghum bicolor Sb07g022920 N
SELMODRAFT_403406 Selaginella moellendorffii SELMODRAFT_403406 N
SELMODRAFT_411945 Selaginella moellendorffii SELMODRAFT_411945 N
Si001743m.g Setaria italica Si001743m.g N
Si003753m.g Setaria italica Si003753m.g N
Si015197m.g Setaria italica Si015197m.g N
Si015349m.g Setaria italica Si015349m.g N
Si030966m.g Setaria italica Si030966m.g N
Solyc02g090950.1 Solanum lycopersicum Solyc02g090950.1 N
Solyc03g121240.1 Solanum lycopersicum Solyc03g121240.1 N
Solyc04g078790.2 Solanum lycopersicum Solyc04g078790.2 N
Solyc06g062460.2 Solanum lycopersicum Solyc06g062460.2 N
Solyc11g005780.1 Solanum lycopersicum Solyc11g005780.1 N
Solyc12g088790.1 Solanum lycopersicum Solyc12g088790.1 N
TCM_000632 Theobroma cacao TCM_000632 N
TCM_001435 Theobroma cacao TCM_001435 N
TCM_028961 Theobroma cacao TCM_028961 N
TCM_033818 Theobroma cacao TCM_033818 N
Thhalv10004846m.g Eutrema salsugineum Thhalv10004846m.g N
Thhalv10011068m.g Eutrema salsugineum Thhalv10011068m.g N
Thhalv10015330m.g Eutrema salsugineum Thhalv10015330m.g N
Thhalv10022273m.g Eutrema salsugineum Thhalv10022273m.g N
Thhalv10029526m.g Eutrema salsugineum Thhalv10029526m.g N
TRAES3BF276900020CFD_g Triticum aestivum TRAES3BF276900020CFD_g N
Traes_5BL_DDC2491F7 Triticum aestivum Traes_5BL_DDC2491F7 N
Traes_6AS_C1A37E015 Triticum aestivum Traes_6AS_C1A37E015 N
Traes_7DL_F43F7A9A3 Triticum aestivum Traes_7DL_F43F7A9A3 N
TRIUR3_19098 Triticum urartu TRIUR3_19098 N
TRIUR3_28638 Triticum urartu TRIUR3_28638 N
VIT_07s0031g00550 Vitis vinifera VIT_07s0031g00550 N
VIT_09s0002g02700 Vitis vinifera VIT_09s0002g02700 N
VIT_18s0001g10400 Vitis vinifera VIT_18s0001g10400 N
XM_002310473.1 Populus trichocarpa POPTR_0007s03950 N