ENSAMEG00000004878 (Ailuropoda melanoleuca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMEG00000004878 T086692_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gli1
M01023_2.00 		Mus musculus
NGACCACCHN
NDGGTGGTCN		 PBM
Peterson et al.(2012)
Gli1 		0.827 1.000
GLI1
M02643_2.00 		Homo sapiens
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI1 		0.827 1.000
Gli1
M08976_2.00 		Mus musculus
RGRCCACCCASV
BSTGGGTGGYCY		 Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C 		0.827 1.000
GLI1
M10176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q2 		0.827 1.000
GLI1
M10177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3_01 		0.827 1.000
GLI1
M10178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3 		0.827 1.000
GLI1
M10179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI_Q6 		0.827 1.000
GLI3
M04416_2.00 		Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX 		0.796 0.886
GLI3
M02642_2.00 		Homo sapiens
GACCACCCANK
MNTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI3 		0.796 0.886
GLI3
M08875_2.00 		Homo sapiens
VRACCACCCAV
BTGGGTGGTYB		 Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B 		0.796 0.886
GLI3
M10167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_01 		0.796 0.886
GLI3
M10168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_Q5_01 		0.796 0.886
GLI3
M04417_2.00 		Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG		 SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX 		0.796 0.886
Gli2
M01024_2.00 		Mus musculus
NGACCACCYN
NRGGTGGTCN		 PBM
Peterson et al.(2012)
Gli2 		0.779 0.851
GLI2
M02875_2.00 		Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC		 SELEX
Jolma et al.(2013)
GLI2_1 		0.779 0.851
GLI2
M02876_2.00 		Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC		 SELEX
Jolma et al.(2013)
GLI2_2 		0.779 0.851
GLI2
M02732_2.00 		Homo sapiens
GACCACMCAN
NTGKGTGGTC		 SELEX
Jolma et al.(2010)
GLI2_monomer 		0.779 0.851
GLI2
M04402_2.00 		Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX 		0.779 0.851
GLI2
M02641_2.00 		Homo sapiens
GACCACCCAHG
CDTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI2 		0.779 0.851
GLI2
M10114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q3 		0.779 0.851
GLI2
M10115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q6 		0.779 0.851
GLI2
M04403_2.00 		Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY		 SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX 		0.779 0.851
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMEP00000005155 C2H2 ZF 235 259
ENSAMEP00000005155 C2H2 ZF 267 294
ENSAMEP00000005155 C2H2 ZF 300 324
ENSAMEP00000005155 C2H2 ZF 330 355
ENSAMEP00000005155 C2H2 ZF 361 386

Links

Other C2H2 ZF family TFs
Other Ailuropoda melanoleuca TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AWRI1499_3461 Brettanomyces bruxellensis AWRI1499_3461 I
BN7_141 Wickerhamomyces ciferrii BN7_141 I
CANTEDRAFT_129585 Candida tenuis CANTEDRAFT_129585 I
CaO19.11483 Candida albicans CaO19.11483 I
CaO19.4000 Candida albicans CaO19.4000 D
CBG14858 Caenorhabditis briggsae CBG14858 I
CBN18011 Caenorhabditis brenneri CBN18011 I
CD36_54680 Candida dubliniensis CD36_54680 I
ceh-54 Caenorhabditis elegans WBGene00020485 D
CGI_10013213 Crassostrea gigas CGI_10013213 I
CPAG_03842 Candida parapsilosis CPAG_03842 I
CRE00191 Caenorhabditis remanei CRE00191 I
CTRG_06116 Candida tropicalis CTRG_06116 I
EDEG_02526 Edhazardia aedis EDEG_02526 I
ENSCAFG00000023214 Canis familiaris ENSCAFG00000023214 I
ENSCHOG00000002622 Choloepus hoffmanni ENSCHOG00000002622 I
ENSSTOG00000023781 Ictidomys tridecemlineatus ENSSTOG00000023781 I
ENSTBEG00000007985 Tupaia belangeri ENSTBEG00000007985 I
Esx1 Mus musculus ENSMUSG00000023443 D
Esx1 Rattus norvegicus ENSRNOG00000048011 I
G210_1625 Candida maltosa G210_1625 I
GLOINDRAFT_4254 Rhizophagus irregularis GLOINDRAFT_4254 I
H311_01337 Anncaliia algerae H311_01337 I
H311_02306 Anncaliia algerae H311_02306 I
JL09_g3549 Pichia kudriavzevii JL09_g3549 I
LELG_04000 Lodderomyces elongisporus LELG_04000 I
Minc16296 Meloidogyne incognita Minc16296 I
ML021120a Mnemiopsis leidyi ML021120a I
PGUG_02484 Candida guilliermondii PGUG_02484 I
PGUG_02484 Meyerozyma guilliermondii PGUG_02484 I
Sakowv30037698m.g Saccoglossus kowalevskii Sakowv30037698m.g I
SEBOX Pteropus vampyrus ENSPVAG00000002882 I
SEBOX Cavia porcellus ENSCPOG00000005498 I
TELCIR_13423 Teladorsagia circumcincta TELCIR_13423 I
TriadG60748 Trichoplax adhaerens TriadG60748 I