CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000000992
(
Pelodiscus sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPSIG00000000992
T107374_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HIC2
M02902_2.00
Homo sapiens
RTGCCMVNN
NNBKGGCAY
SELEX
Jolma et al.(2013)
HIC2_1
0.823
0.965
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN
NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.793
0.861
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC
GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.793
0.861
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN
NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.793
0.861
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH
DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.793
0.861
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000000990
C2H2 ZF
401
423
YVCIPCGKGFPSSEQLNAHVETH
ENSPSIP00000000990
C2H2 ZF
459
481
FKCSICEKSYKDPATLRQHEKTH
ENSPSIP00000000990
C2H2 ZF
487
509
FPCNICGKMFTQRGTMTRHMRSH
ENSPSIP00000000990
C2H2 ZF
515
537
FACEECGMRFTRQYRLTEHMRVH
ENSPSIP00000000990
C2H2 ZF
543
565
YECQLCGGKFTQQRNLISHLRMH
Links
Other
C2H2 ZF
family TFs
Other
Pelodiscus sinensis
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG010485.1
Alligator sinensis
Alligator_sinensis_CCG010485.1
I
Cmyd_10006231
Chelonia mydas
Cmyd_10006231
I
ENSAMEG00000001482
Ailuropoda melanoleuca
ENSAMEG00000001482
I
ENSAMXG00000004952
Astyanax mexicanus
ENSAMXG00000004952
I
ENSCSAG00000014744
Chlorocebus sabaeus
ENSCSAG00000014744
I
ENSMEUG00000000043
Macropus eugenii
ENSMEUG00000000043
I
ENSMPUG00000009522
Mustela putorius furo
ENSMPUG00000009522
I
ENSNLEG00000013211
Nomascus leucogenys
ENSNLEG00000013211
I
ENSP00000358092
Macaca fascicularis
ENSP00000358092
I
ENSPANG00000016727
Papio anubis
ENSPANG00000016727
I
ENSPPYG00000016879
Pongo abelii
ENSPPYG00000016879
I
ENSPSIG00000002661
Pelodiscus sinensis
ENSPSIG00000002661
I
ENSSHAG00000010080
Sarcophilus harrisii
ENSSHAG00000010080
I
ENSSTOG00000016505
Ictidomys tridecemlineatus
ENSSTOG00000016505
I
ENSTNIG00000012300
Tetraodon nigroviridis
ENSTNIG00000012300
I
ENSTSYG00000011666
Tarsius syrichta
ENSTSYG00000011666
I
Myotis_brandtii_PRDM1_10034696
Myotis brandtii
Myotis_brandtii_PRDM1_10034696
I
Prdm1
Rattus norvegicus
ENSRNOG00000000323
I
PRDM1
Canis familiaris
ENSCAFG00000003694
I
PRDM1
Callithrix jacchus
ENSCJAG00000006332
I
PRDM1
Cavia porcellus
ENSCPOG00000014064
I
PRDM1
Equus caballus
ENSECAG00000009044
I
PRDM1
Tursiops truncatus
ENSTTRG00000012894
I
PRDM1
Erinaceus europaeus
ENSEEUG00000013222
I
PRDM1
Echinops telfairi
ENSETEG00000019669
I
PRDM1
Tupaia belangeri
ENSTBEG00000004089
I
PRDM1
Felis catus
ENSFCAG00000010755
I
PRDM1
Sus scrofa
ENSSSCG00000004369
I
PRDM1
Homo sapiens
ENSG00000057657
D
PRDM1
Sorex araneus
ENSSARG00000004079
I
PRDM1
Monodelphis domestica
ENSMODG00000018029
I
PRDM1
Pteropus vampyrus
ENSPVAG00000011732
I
PRDM1
Pan troglodytes
ENSPTRG00000018457
I
PRDM1
Gorilla gorilla
ENSGGOG00000001929
I
PRDM1
Loxodonta africana
ENSLAFG00000013436
I
PRDM1
Microcebus murinus
ENSMICG00000010329
I
PRDM1
Ochotona princeps
ENSOPRG00000006055
I
PRDM1
Otolemur garnettii
ENSOGAG00000014036
I
PRDM1
Oryctolagus cuniculus
ENSOCUG00000015495
I
PRDM1
Ornithorhynchus anatinus
ENSOANG00000004176
I
PRDM1
Myotis lucifugus
ENSMLUG00000014085
I
Prdm1
Mus musculus
ENSMUSG00000038151
D
PRDM1
Macaca mulatta
ENSMMUG00000021401
I