ZNF140 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000023960 T108306_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF140
M04621_2.00 		Homo sapiens
DRCAATTCCGCTCN
NGAGCGGAATTGYH		 SELEX
Yin et al.(2017)
ZNF140_eDBD_HT-SELEX 		0.825 0.996
ZNF140
M08372_2.00 		Homo sapiens
CAATTCYGCYCHNNNNNNNNNNNB
VNNNNNNNNNNNDGRGCRGAATTG		 ChIP-seq
Schmitges et al.(2016)
P52738_3-10.RCADE 		0.825 0.996
ZNF140
M08945_2.00 		Homo sapiens
NNNDNYBYWGCAATTCYRCTCCHN
NDGGAGYRGAATTGCWRVRNHNNN		 Misc
Kulakovskiy et al.(2013)
ZN140_HUMAN.H11MO.0.C 		0.825 0.996
ZNF140
M04622_2.00 		Homo sapiens
NRCAATTCCGCTCV
BGAGCGGAATTGYN		 SELEX
Yin et al.(2017)
ZNF140_eDBD_Methyl-HT-SELEX 		0.825 0.996
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000040479 C2H2 ZF 161 183
ENSPTRP00000040479 C2H2 ZF 189 211
ENSPTRP00000040479 C2H2 ZF 217 239
ENSPTRP00000040479 C2H2 ZF 245 267
ENSPTRP00000040479 C2H2 ZF 273 295
ENSPTRP00000040479 C2H2 ZF 301 323
ENSPTRP00000040479 C2H2 ZF 329 351
ENSPTRP00000040479 C2H2 ZF 357 379
ENSPTRP00000040479 C2H2 ZF 385 407
ENSPTRP00000040479 C2H2 ZF 413 435

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29838.m001690 Ricinus communis 29838.m001690 I
AGL24 Arabidopsis thaliana AT4G24540 I
AGL24 Arabidopsis lyrata fgenesh2_kg.7__1822__AT4G24540.1 I
AGL24 Vitis vinifera VIT_18s0001g07460 I
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I
Aquca_015_00177 Aquilegia coerulea Aquca_015_00177 I
BGIOSGA011317 Oryza indica BGIOSGA011317 I
Bo1g039080 Brassica oleracea Bo1g039080 I
Bo4g149800 Brassica oleracea Bo4g149800 I
Bo7g109590 Brassica oleracea Bo7g109590 I
Bo8g101000 Brassica oleracea Bo8g101000 I
Bostr.19427s0024 Boechera stricta Bostr.19427s0024 I
Bostr.7867s0261 Boechera stricta Bostr.7867s0261 I
Bra013812 Brassica rapa Bra013812 I
Bra019221 Brassica rapa Bra019221 I
Bra030228 Brassica rapa Bra030228 I
Bra038511 Brassica rapa Bra038511 I
Cagra.1080s0011 Capsella grandiflora Cagra.1080s0011 I
Cagra.2171s0007 Capsella grandiflora Cagra.2171s0007 I
Carubv10005653m.g Capsella rubella Carubv10005653m.g I
Carubv10023941m.g Capsella rubella Carubv10023941m.g I
cassava1567.valid.m1 Manihot esculenta cassava1567.valid.m1 I
cassava31070.valid.m1 Manihot esculenta cassava31070.valid.m1 I
cassava31071.valid.m1 Manihot esculenta cassava31071.valid.m1 I
cassava42879.valid.m1 Manihot esculenta cassava42879.valid.m1 I
Ca_01491 Cicer arietinum Ca_01491 I
Ca_12416 Cicer arietinum Ca_12416 I
Ca_21060 Cicer arietinum Ca_21060 I
Ciclev10026457m.g Citrus clementina Ciclev10026457m.g I
Ciclev10029776m.g Citrus clementina Ciclev10029776m.g I
Cla014322 Citrullus lanatus Cla014322 I
Cla022499 Citrullus lanatus Cla022499 I
Cucsa.104010 Cucumis sativus Cucsa.104010 I
Cucsa.160640 Cucumis sativus Cucsa.160640 I
Eucgr.F00420 Eucalyptus grandis Eucgr.F00420 I
Eucgr.F02141 Eucalyptus grandis Eucgr.F02141 I
Eucgr.F02145 Eucalyptus grandis Eucgr.F02145 I
evm.TU.supercontig_21.11 Carica papaya evm.TU.supercontig_21.11 I
evm.TU.supercontig_55.31 Carica papaya evm.TU.supercontig_55.31 I
gene03714-v1.0-hybrid Fragaria vesca gene03714-v1.0-hybrid I
gene03748-v1.0-hybrid Fragaria vesca gene03748-v1.0-hybrid I
gene05180-v1.0-hybrid Fragaria vesca gene05180-v1.0-hybrid I
gene12119-v1.0-hybrid Fragaria vesca gene12119-v1.0-hybrid I
gene12120-v1.0-hybrid Fragaria vesca gene12120-v1.0-hybrid I
gene20808-v1.0-hybrid Fragaria vesca gene20808-v1.0-hybrid I
gene30741-v1.0-hybrid Fragaria vesca gene30741-v1.0-hybrid I
GLYMA01G02880 Glycine max GLYMA01G02880 I
GLYMA02G04710 Glycine max GLYMA02G04710 I
GLYMA04G10015 Glycine max GLYMA04G10015 I
GLYMA06G10020 Glycine max GLYMA06G10020 I
GLYMA15G06302 Glycine max GLYMA15G06302 I
Gorai.002G142700 Gossypium raimondii Gorai.002G142700 I
Gorai.005G225500 Gossypium raimondii Gorai.005G225500 I
Gorai.008G017200 Gossypium raimondii Gorai.008G017200 I
Gorai.008G092300 Gossypium raimondii Gorai.008G092300 I
Gorai.010G035000 Gossypium raimondii Gorai.010G035000 I
Gorai.013G055700 Gossypium raimondii Gorai.013G055700 I
GRMZM2G059102 Zea mays GRMZM2G059102 I
GSMUA_Achr3G06800_001 Musa acuminata GSMUA_Achr3G06800_001 I
GSMUA_Achr9G15180_001 Musa acuminata GSMUA_Achr9G15180_001 I
LjT38P01.180.nd Lotus japonicus LjT38P01.180.nd I
LPERR03G05670 Leersia perrieri LPERR03G05670 I
Lus10025719.g Linum usitatissimum Lus10025719.g I
Lus10035942.g Linum usitatissimum Lus10035942.g I
MDP0000132226 Malus domestica MDP0000132226 N
MDP0000143531 Malus domestica MDP0000143531 N
MDP0000209705 Malus domestica MDP0000209705 I
MDP0000233948 Malus domestica MDP0000233948 I
MDP0000255146 Malus domestica MDP0000255146 I
MDP0000259294 Malus domestica MDP0000259294 I
MDP0000277582 Malus domestica MDP0000277582 N
MDP0000311107 Malus domestica MDP0000311107 N
MDP0000322567 Malus domestica MDP0000322567 I
MDP0000378412 Malus domestica MDP0000378412 I
MDP0000527190 Malus domestica MDP0000527190 I
mgf015964m Mimulus guttatus mgf015964m I
mgf018870m Mimulus guttatus mgf018870m I
MTR_5g032150 Medicago truncatula MTR_5g032150 I
MTR_5g032520 Medicago truncatula MTR_5g032520 I
MTR_5g066180 Medicago truncatula MTR_5g066180 I
OBART03G06320 Oryza barthii OBART03G06320 I
OGLUM03G06330 Oryza glumaepatula OGLUM03G06330 I
OMERI03G06190 Oryza meridionalis OMERI03G06190 I
ONIVA02G06550 Oryza nivara ONIVA02G06550 I
OPUNC03G06100 Oryza punctata OPUNC03G06100 I
orange1.1g027190m.g Citrus sinensis orange1.1g027190m.g I
orange1.1g034384m.g Citrus sinensis orange1.1g034384m.g I
orange1.1g040972m.g Citrus sinensis orange1.1g040972m.g I
ORGLA03G0061100 Oryza glaberrima ORGLA03G0061100 I
ORUFI03G06210 Oryza rufipogon ORUFI03G06210 I
OS03G0186600 Oryza sativa OS03G0186600 I
Pavir.Ia04527 Panicum virgatum Pavir.Ia04527 I
Pavir.Ib00555 Panicum virgatum Pavir.Ib00555 I
PGSC0003DMG400009363 Solanum tuberosum PGSC0003DMG400009363 I
PGSC0003DMG400016203 Solanum tuberosum PGSC0003DMG400016203 I
PGSC0003DMG400033570 Solanum tuberosum PGSC0003DMG400033570 I
PK10580.1 Cannabis sativa PK10580.1 I
Pm002166 Prunus mume Pm002166 I
Pm004415 Prunus mume Pm004415 I
Pm004416 Prunus mume Pm004416 I
Pm004418 Prunus mume Pm004418 I
Pm004419 Prunus mume Pm004419 I
Pm004420 Prunus mume Pm004420 I
Pm022002 Prunus mume Pm022002 I
POPTR_0002s10570 Populus trichocarpa POPTR_0002s10570 I
POPTR_0007s03270 Populus trichocarpa POPTR_0007s03270 I
POPTR_0007s03290 Populus trichocarpa POPTR_0007s03290 I
POPTR_0007s14300 Populus trichocarpa POPTR_0007s14300 I
PRUPE_ppa010714mg Prunus persica PRUPE_ppa010714mg I
PRUPE_ppa010758mg Prunus persica PRUPE_ppa010758mg I
PRUPE_ppa010822mg Prunus persica PRUPE_ppa010822mg I
PRUPE_ppa011063mg Prunus persica PRUPE_ppa011063mg I
PRUPE_ppa011123mg Prunus persica PRUPE_ppa011123mg I
PRUPE_ppa018667mg Prunus persica PRUPE_ppa018667mg I
PRUPE_ppa022274mg Prunus persica PRUPE_ppa022274mg I
PRUPE_ppb017585mg Prunus persica PRUPE_ppb017585mg I
SapurV1A.0004s1140 Salix purpurea SapurV1A.0004s1140 I
SapurV1A.0187s0010 Salix purpurea SapurV1A.0187s0010 I
SapurV1A.1777s0020 Salix purpurea SapurV1A.1777s0020 I
Sb01g044810 Sorghum bicolor Sb01g044810 I
Si037358m.g Setaria italica Si037358m.g I
Solyc01g087990.2 Solanum lycopersicum Solyc01g087990.2 I
Solyc01g105800.2 Solanum lycopersicum Solyc01g105800.2 I
Solyc11g010570.1 Solanum lycopersicum Solyc11g010570.1 I
SVP Arabidopsis thaliana AT2G22540 D
SVP Arabidopsis lyrata fgenesh2_kg.4__174__AT2G22540.1 I
SVP Vitis vinifera VIT_00s0313g00070 I
TCM_000992 Theobroma cacao TCM_000992 I
TCM_007378 Theobroma cacao TCM_007378 I
TCM_034501 Theobroma cacao TCM_034501 I
Thhalv10000308m.g Eutrema salsugineum Thhalv10000308m.g I
Thhalv10026757m.g Eutrema salsugineum Thhalv10026757m.g I
Traes_7DS_366A869CF Triticum aestivum Traes_7DS_366A869CF I
VIT_03s0017g00360 Vitis vinifera VIT_03s0017g00360 I
VIT_15s0107g00120 Vitis vinifera VIT_15s0107g00120 I