ENSSHAG00000010080 (Sarcophilus harrisii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSHAG00000010080 T110008_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Prdm1
M08995_2.00 		Mus musculus
NNACTTTCHCTTYY
RRAAGDGAAAGTNN		 Misc
Kulakovskiy et al.(2013)
PRDM1_MOUSE.H11MO.0.A 		0.819 0.965
PRDM1
M02874_2.00 		Homo sapiens
NHACTTTCACTTTYN
NRAAAGTGAAAGTDN		 SELEX
Jolma et al.(2013)
PRDM1_1 		0.819 0.956
PRDM1
M02731_2.00 		Homo sapiens
YACTTTCACTTT
AAAGTGAAAGTR		 SELEX
Jolma et al.(2010)
PRDM1_dimer 		0.819 0.956
PRDM1
M04396_2.00 		Homo sapiens
NYACTTTCVCYN
NRGBGAAAGTRN		 SELEX
Yin et al.(2017)
PRDM1_eDBD_HT-SELEX 		0.819 0.956
PRDM1
M08083_2.00 		Homo sapiens
NHACTTTCHY
RDGAAAGTDN		 ChIP-seq
Mathelier et al.(2014)
MA0508.2 		0.819 0.956
PRDM1
M07845_2.00 		Homo sapiens
NHACTTTCHCTTHYN
NRDAAGDGAAAGTDN		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_PRDM1_Stanford 		0.819 0.956
PRDM1
M08191_2.00 		Homo sapiens
ACTTTCAC
GTGAAAGT		 ChIP-seq
Contrino et al.(2012)
Mv110 		0.819 0.956
PRDM1
M08192_2.00 		Homo sapiens
HRTCACTTT
AAAGTGAYD		 ChIP-seq
Contrino et al.(2012)
Mv112 		0.819 0.956
PRDM1
M08276_2.00 		Homo sapiens
HHNBYVCTTTCHCYY
RRGDGAAAGBRVNDD		 ChIP-seq
Schmitges et al.(2016)
O75626.MEME 		0.819 0.956
PRDM1
M08854_2.00 		Homo sapiens
NNACTTTCHCTTYY
RRAAGDGAAAGTNN		 Misc
Kulakovskiy et al.(2013)
PRDM1_HUMAN.H11MO.0.A 		0.819 0.956
PRDM1
M09500_2.00 		Homo sapiens
ACTTTCHCTKNN
NNMAGDGAAAGT		 Misc
Heinz et al.(2010)
Hela-PRDM1_GSE31477 		0.819 0.956
PRDM1
M10108_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BLIMP1_Q4 		0.819 0.956
PRDM1
M10109_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BLIMP1_Q6_01 		0.819 0.956
PRDM1
M10110_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BLIMP1_Q6 		0.819 0.956
PRDM1
M10111_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRDM1_03 		0.819 0.956
PRDM1
M04397_2.00 		Homo sapiens
NCACTTTCVCYN
NRGBGAAAGTGN		 SELEX
Yin et al.(2017)
PRDM1_eDBD_Methyl-HT-SELEX 		0.819 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSHAP00000011740 C2H2 ZF 566 588
ENSSHAP00000011740 C2H2 ZF 594 616
ENSSHAP00000011740 C2H2 ZF 622 644
ENSSHAP00000011740 C2H2 ZF 650 672
ENSSHAP00000011740 C2H2 ZF 678 699
ENSSHAP00000011741 C2H2 ZF 566 588
ENSSHAP00000011741 C2H2 ZF 594 616
ENSSHAP00000011741 C2H2 ZF 622 644
ENSSHAP00000011741 C2H2 ZF 650 672
ENSSHAP00000011741 C2H2 ZF 678 699

Links

Other C2H2 ZF family TFs
Other Sarcophilus harrisii TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG010485.1 Alligator sinensis Alligator_sinensis_CCG010485.1 I 0.819
Cmyd_10006231 Chelonia mydas Cmyd_10006231 I 0.819
ENSAMEG00000001482 Ailuropoda melanoleuca ENSAMEG00000001482 I 0.816
ENSAMXG00000004952 Astyanax mexicanus ENSAMXG00000004952 I 0.783
ENSCSAG00000014744 Chlorocebus sabaeus ENSCSAG00000014744 I 0.819
ENSMEUG00000000043 Macropus eugenii ENSMEUG00000000043 I 0.825
ENSMPUG00000009522 Mustela putorius furo ENSMPUG00000009522 I 0.816
ENSNLEG00000013211 Nomascus leucogenys ENSNLEG00000013211 I 0.819
ENSP00000358092 Macaca fascicularis ENSP00000358092 I 0.819
ENSPANG00000016727 Papio anubis ENSPANG00000016727 I 0.819
ENSPPYG00000016879 Pongo abelii ENSPPYG00000016879 I 0.819
ENSPSIG00000002661 Pelodiscus sinensis ENSPSIG00000002661 I 0.819
ENSSTOG00000016505 Ictidomys tridecemlineatus ENSSTOG00000016505 I 0.819
ENSTNIG00000012300 Tetraodon nigroviridis ENSTNIG00000012300 I 0.768
ENSTSYG00000011666 Tarsius syrichta ENSTSYG00000011666 I 0.819
Myotis_brandtii_PRDM1_10034696 Myotis brandtii Myotis_brandtii_PRDM1_10034696 I 0.816
Prdm1 Rattus norvegicus ENSRNOG00000000323 I 0.819
PRDM1 Canis familiaris ENSCAFG00000003694 I 0.816
PRDM1 Callithrix jacchus ENSCJAG00000006332 I 0.819
PRDM1 Cavia porcellus ENSCPOG00000014064 I 0.811
PRDM1 Equus caballus ENSECAG00000009044 I 0.816
PRDM1 Tursiops truncatus ENSTTRG00000012894 I 0.816
PRDM1 Erinaceus europaeus ENSEEUG00000013222 I 0.816
PRDM1 Echinops telfairi ENSETEG00000019669 I 0.811
PRDM1 Tupaia belangeri ENSTBEG00000004089 I 0.819
PRDM1 Felis catus ENSFCAG00000010755 I 0.816
PRDM1 Sus scrofa ENSSSCG00000004369 I 0.816
PRDM1 Homo sapiens ENSG00000057657 D 0.819
PRDM1 Sorex araneus ENSSARG00000004079 I 0.816
PRDM1 Monodelphis domestica ENSMODG00000018029 I 0.819
PRDM1 Pteropus vampyrus ENSPVAG00000011732 I 0.816
PRDM1 Pan troglodytes ENSPTRG00000018457 I 0.819
PRDM1 Gorilla gorilla ENSGGOG00000001929 I 0.819
PRDM1 Loxodonta africana ENSLAFG00000013436 I 0.819
PRDM1 Microcebus murinus ENSMICG00000010329 I 0.821
PRDM1 Ochotona princeps ENSOPRG00000006055 I 0.819
PRDM1 Otolemur garnettii ENSOGAG00000014036 I 0.819
PRDM1 Oryctolagus cuniculus ENSOCUG00000015495 I 0.811
PRDM1 Ornithorhynchus anatinus ENSOANG00000004176 I 0.821
PRDM1 Myotis lucifugus ENSMLUG00000014085 I 0.816
Prdm1 Mus musculus ENSMUSG00000038151 D 0.819
PRDM1 Macaca mulatta ENSMMUG00000021401 I 0.819