CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zic2b
(
Takifugu rubripes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTRUG00000011863
T112393_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000029980
C2H2 ZF
238
256
CNKTFSTMHELVTHVTVEH
ENSTRUP00000029980
C2H2 ZF
265
287
HVCFWEDCGRESKPFKAKYKLVR
ENSTRUP00000029980
C2H2 ZF
326
350
FQCEFEGCDRRFANSSDRKKHMHVH
ENSTRUP00000029980
C2H2 ZF
356
378
YLCKMCDKSYTHPSSLRKHMKVH
ENSTRUP00000029981
C2H2 ZF
238
256
CNKTFSTMHELVTHVTVEH
ENSTRUP00000029981
C2H2 ZF
265
287
HVCFWEDCGRESKPFKAKYKLVI
ENSTRUP00000029981
C2H2 ZF
298
322
FQCEFEGCDRRFANSSDRKKHMHVH
Links
Other
C2H2 ZF
family TFs
Other
Takifugu rubripes
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA036374
Oryza indica
BGIOSGA036374
N
BRADI4G39130
Brachypodium distachyon
BRADI4G39130
N
F775_01850
Aegilops tauschii
F775_01850
N
LPERR12G07400
Leersia perrieri
LPERR12G07400
N
MLOC_55909
Hordeum vulgare
MLOC_55909
N
OB12G17360
Oryza brachyantha
OB12G17360
N
OBART12G08590
Oryza barthii
OBART12G08590
N
OGLUM12G09840
Oryza glumaepatula
OGLUM12G09840
N
OLONG_018459
Oryza longistaminata
OLONG_018459
N
OMERI12G06120
Oryza meridionalis
OMERI12G06120
N
ONIVA12G08260
Oryza nivara
ONIVA12G08260
N
OPUNC12G07790
Oryza punctata
OPUNC12G07790
N
ORGLA12G0080500
Oryza glaberrima
ORGLA12G0080500
N
ORUFI12G09490
Oryza rufipogon
ORUFI12G09490
N
Pavir.Cb01041
Panicum virgatum
Pavir.Cb01041
N
Pavir.J05247
Panicum virgatum
Pavir.J05247
N
Traes_5AS_7E3208FD4
Triticum aestivum
Traes_5AS_7E3208FD4
N
Traes_5BS_23717182B
Triticum aestivum
Traes_5BS_23717182B
N
Traes_5DS_976CBF9EB
Triticum aestivum
Traes_5DS_976CBF9EB
N
TRIUR3_21570
Triticum urartu
TRIUR3_21570
N