CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_5BS_23717182B
(
Triticum aestivum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Traes_5BS_23717182B
T130618_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_5BS_23717182B.1
C2H2 ZF
1101
1124
FPCDIEGCDMSFSSQQDLLLHKRD
Traes_5BS_23717182B.1
C2H2 ZF
1154
1178
LNCEWKGCKKTFKWPWARTEHMRVH
Traes_5BS_23717182B.1
C2H2 ZF
1184
1210
YECMVPGCGQTFRFVSDFSRHKRKTGH
Links
Other
C2H2 ZF
family TFs
Other
Triticum aestivum
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_01850
Aegilops tauschii
F775_01850
N
0.827
MLOC_55909
Hordeum vulgare
MLOC_55909
N
0.827
Traes_5AS_7E3208FD4
Triticum aestivum
Traes_5AS_7E3208FD4
N
0.827
Traes_5DS_976CBF9EB
Triticum aestivum
Traes_5DS_976CBF9EB
N
0.827
TRIUR3_21570
Triticum urartu
TRIUR3_21570
N
0.827
BGIOSGA036374
Oryza indica
BGIOSGA036374
N
0.803
LPERR12G07400
Leersia perrieri
LPERR12G07400
N
0.803
OBART12G08590
Oryza barthii
OBART12G08590
N
0.803
OGLUM12G09840
Oryza glumaepatula
OGLUM12G09840
N
0.803
OLONG_018459
Oryza longistaminata
OLONG_018459
N
0.803
OMERI12G06120
Oryza meridionalis
OMERI12G06120
N
0.803
ONIVA12G08260
Oryza nivara
ONIVA12G08260
N
0.803
OPUNC12G07790
Oryza punctata
OPUNC12G07790
N
0.803
ORGLA12G0080500
Oryza glaberrima
ORGLA12G0080500
N
0.803
ORUFI12G09490
Oryza rufipogon
ORUFI12G09490
N
0.803
OS12G0279100
Oryza sativa
OS12G0279100
N
0.803
OB12G17360
Oryza brachyantha
OB12G17360
N
0.787
BRADI4G39130
Brachypodium distachyon
BRADI4G39130
N
0.767
Pavir.Cb01041
Panicum virgatum
Pavir.Cb01041
N
0.758
Pavir.J05247
Panicum virgatum
Pavir.J05247
N
0.758