MLOC_55909 (Hordeum vulgare)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 MLOC_55909 T123601_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_55909.1 C2H2 ZF 674 697
MLOC_55909.1 C2H2 ZF 727 751
MLOC_55909.1 C2H2 ZF 757 783
MLOC_55909.2 C2H2 ZF 707 730
MLOC_55909.2 C2H2 ZF 760 784
MLOC_55909.2 C2H2 ZF 790 816
MLOC_55909.3 C2H2 ZF 674 697
MLOC_55909.3 C2H2 ZF 727 751
MLOC_55909.3 C2H2 ZF 757 783

Links

Other C2H2 ZF family TFs
Other Hordeum vulgare TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_01850 Aegilops tauschii F775_01850 N 0.827
Traes_5AS_7E3208FD4 Triticum aestivum Traes_5AS_7E3208FD4 N 0.827
Traes_5BS_23717182B Triticum aestivum Traes_5BS_23717182B N 0.827
Traes_5DS_976CBF9EB Triticum aestivum Traes_5DS_976CBF9EB N 0.827
TRIUR3_21570 Triticum urartu TRIUR3_21570 N 0.827
BGIOSGA036374 Oryza indica BGIOSGA036374 N 0.803
LPERR12G07400 Leersia perrieri LPERR12G07400 N 0.803
OBART12G08590 Oryza barthii OBART12G08590 N 0.803
OGLUM12G09840 Oryza glumaepatula OGLUM12G09840 N 0.803
OLONG_018459 Oryza longistaminata OLONG_018459 N 0.803
OMERI12G06120 Oryza meridionalis OMERI12G06120 N 0.803
ONIVA12G08260 Oryza nivara ONIVA12G08260 N 0.803
OPUNC12G07790 Oryza punctata OPUNC12G07790 N 0.803
ORGLA12G0080500 Oryza glaberrima ORGLA12G0080500 N 0.803
ORUFI12G09490 Oryza rufipogon ORUFI12G09490 N 0.803
OS12G0279100 Oryza sativa OS12G0279100 N 0.803
OB12G17360 Oryza brachyantha OB12G17360 N 0.787
BRADI4G39130 Brachypodium distachyon BRADI4G39130 N 0.767
Pavir.Cb01041 Panicum virgatum Pavir.Cb01041 N 0.758
Pavir.J05247 Panicum virgatum Pavir.J05247 N 0.758