GSMUA_Achr6G34890_001 (Musa acuminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GSMUA_Achr6G34890_001 T118726_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.756 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr6P34890_001 C2H2 ZF 153 175
GSMUA_Achr6P34890_001 C2H2 ZF 192 214

Links

Other C2H2 ZF family TFs
Other Musa acuminata TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA010469 Oryza indica BGIOSGA010469 N 0.770
BGIOSGA010470 Oryza indica BGIOSGA010470 N 0.770
BGIOSGA033523 Oryza indica BGIOSGA033523 N 0.758
BGIOSGA033525 Oryza indica BGIOSGA033525 N 0.758
Bo7g117320 Brassica oleracea Bo7g117320 I 0.771
Bostr.5325s0123 Boechera stricta Bostr.5325s0123 I 0.756
Bostr.7867s1389 Boechera stricta Bostr.7867s1389 I 0.777
Bra017706 Brassica rapa Bra017706 I 0.777
BRADI2G49250 Brachypodium distachyon BRADI2G49250 N 0.770
BRADI4G09410 Brachypodium distachyon BRADI4G09410 I 0.756
Cagra.2350s0072 Capsella grandiflora Cagra.2350s0072 I 0.777
F775_12743 Aegilops tauschii F775_12743 N 0.770
GRMZM5G883760 Zea mays GRMZM5G883760 N 0.770
GSMUA_Achr10G31400_001 Musa acuminata GSMUA_Achr10G31400_001 N 0.770
GSMUA_Achr11G23970_001 Musa acuminata GSMUA_Achr11G23970_001 I 0.762
GSMUA_Achr7G20260_001 Musa acuminata GSMUA_Achr7G20260_001 N 0.775
gw1.254.15.1 Physcomitrella patens gw1.254.15.1 I 0.776
LPERR03G19190 Leersia perrieri LPERR03G19190 N 0.770
Lus10040312.g Linum usitatissimum Lus10040312.g I 0.767
OB03G31790 Oryza brachyantha OB03G31790 N 0.770
OB11G27850 Oryza brachyantha OB11G27850 N 0.758
OBART03G22560 Oryza barthii OBART03G22560 N 0.770
OGLUM03G23340 Oryza glumaepatula OGLUM03G23340 N 0.770
OPUNC03G21190 Oryza punctata OPUNC03G21190 N 0.770
ORGLA03G0210200 Oryza glaberrima ORGLA03G0210200 N 0.770
ORUFI03G23230 Oryza rufipogon ORUFI03G23230 N 0.770
ORUFI04G17060 Oryza rufipogon ORUFI04G17060 N 0.762
OS03G0437100 Oryza sativa OS03G0437100 N 0.770
OS11G0340477 Oryza sativa OS11G0340477 N 0.770
OS11G0702300 Oryza sativa OS11G0702300 N 0.758
PDK_20s1446781g002 Phoenix dactylifera PDK_20s1446781g002 N 0.773
PGSC0003DMG400024550 Solanum tuberosum PGSC0003DMG400024550 I 0.756
Sb01g031920 Sorghum bicolor Sb01g031920 N 0.770
scaffold_700593.1 Arabidopsis lyrata scaffold_700593.1 I 0.777
Si037516m.g Setaria italica Si037516m.g N 0.770
Solyc03g115450.1 Solanum lycopersicum Solyc03g115450.1 I 0.756
Thhalv10025912m.g Eutrema salsugineum Thhalv10025912m.g I 0.768
Traes_2BS_494F02775 Triticum aestivum Traes_2BS_494F02775 N 0.770
Traes_2DS_11ADF414D Triticum aestivum Traes_2DS_11ADF414D N 0.770
ZAT1 Arabidopsis thaliana AT1G02030 D 0.756
ZAT3 Arabidopsis thaliana AT4G35280 I 0.777