ORGLA04G0016600 (Oryza glaberrima)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ORGLA04G0016600 T125092_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA04G0016600.1 C2H2 ZF 283 305
ORGLA04G0016600.1 C2H2 ZF 306 331

Links

Other C2H2 ZF family TFs
Other Oryza glaberrima TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29814.m000736 Ricinus communis 29814.m000736 I
AC213884.3_FG002 Zea mays AC213884.3_FG002 N
Aquca_007_00776 Aquilegia coerulea Aquca_007_00776 I
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I
BGIOSGA018238 Oryza indica BGIOSGA018238 I
BGIOSGA018239 Oryza indica BGIOSGA018239 I
Bo2g167960 Brassica oleracea Bo2g167960 I
Bo7g063830 Brassica oleracea Bo7g063830 I
Bo7g099180 Brassica oleracea Bo7g099180 I
Bo8g079430 Brassica oleracea Bo8g079430 I
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I
Bostr.6864s0236 Boechera stricta Bostr.6864s0236 I
Bra012149 Brassica rapa Bra012149 I
Bra012910 Brassica rapa Bra012910 I
Bra036048 Brassica rapa Bra036048 I
BRADI2G28910 Brachypodium distachyon BRADI2G28910 N
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I
Cagra.1549s0005 Capsella grandiflora Cagra.1549s0005 I
Carubv10019440m.g Capsella rubella Carubv10019440m.g I
Carubv10027659m.g Capsella rubella Carubv10027659m.g I
cassava41257.m1 Manihot esculenta cassava41257.m1 I
cassava47374.m1 Manihot esculenta cassava47374.m1 I
Ca_12468 Cicer arietinum Ca_12468 I
chr2.CM0002.110.nc Lotus japonicus chr2.CM0002.110.nc I
Cla004431 Citrullus lanatus Cla004431 I
Cla020946 Citrullus lanatus Cla020946 I
Cla022947 Citrullus lanatus Cla022947 I
CM0528.210.nd Lotus japonicus CM0528.210.nd I
Cucsa.368410 Cucumis sativus Cucsa.368410 I
Cucsa.395890 Cucumis sativus Cucsa.395890 I
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I
F3A4.140 Arabidopsis thaliana AT3G50060 D
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I
GLYMA05G21220 Glycine max GLYMA05G21220 I
GLYMA14G09540 Glycine max GLYMA14G09540 I
GLYMA17G35620 Glycine max GLYMA17G35620 I
Gorai.002G009300 Gossypium raimondii Gorai.002G009300 I
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I
GRMZM2G145444 Zea mays GRMZM2G145444 I
GRMZM2G369799 Zea mays GRMZM2G369799 I
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I
LPERR02G05810 Leersia perrieri LPERR02G05810 I
LPERR05G10150 Leersia perrieri LPERR05G10150 I
Lus10007503.g Linum usitatissimum Lus10007503.g I
Lus10010238.g Linum usitatissimum Lus10010238.g I
Lus10014103.g Linum usitatissimum Lus10014103.g I
Lus10028979.g Linum usitatissimum Lus10028979.g I
Lus10040940.g Linum usitatissimum Lus10040940.g I
MDP0000187872 Malus domestica MDP0000187872 I
mgf014089m Mimulus guttatus mgf014089m I
mgf020432m Mimulus guttatus mgf020432m I
mgf023922m Mimulus guttatus mgf023922m I
MLOC_26177 Hordeum vulgare MLOC_26177 N
MTR_4g094982 Medicago truncatula MTR_4g094982 I
MYB25 Arabidopsis lyrata Al_scaffold_0004_2572 I
MYB44 Arabidopsis thaliana AT5G67300 D
MYB77 Arabidopsis lyrata fgenesh2_kg.5__1356__AT3G50060.1 I
OGLUM05G13590 Oryza glumaepatula OGLUM05G13590 I
OMERI05G11510 Oryza meridionalis OMERI05G11510 I
ONIVA05G13470 Oryza nivara ONIVA05G13470 I
OPUNC05G11020 Oryza punctata OPUNC05G11020 I
ORGLA05G0109400 Oryza glaberrima ORGLA05G0109400 I
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I
Pavir.Ca02945 Panicum virgatum Pavir.Ca02945 I
Pavir.Cb00156 Panicum virgatum Pavir.Cb00156 I
Pavir.J23512 Panicum virgatum Pavir.J23512 I
Pavir.J33236 Panicum virgatum Pavir.J33236 I
PGSC0003DMG400003316 Solanum tuberosum PGSC0003DMG400003316 I
PK17282.1 Cannabis sativa PK17282.1 I
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I
POPTR_0009s09890 Populus trichocarpa POPTR_0009s09890 I
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I
Sb04g005940 Sorghum bicolor Sb04g005940 I
Sb09g016570 Sorghum bicolor Sb09g016570 I
Si017917m.g Setaria italica Si017917m.g I
Si024344m.g Setaria italica Si024344m.g I
Solyc04g078420.1 Solanum lycopersicum Solyc04g078420.1 I
TCM_007138 Theobroma cacao TCM_007138 I
TCM_042474 Theobroma cacao TCM_042474 I
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I
Thhalv10010581m.g Eutrema salsugineum Thhalv10010581m.g I
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I