ORUFI03G10000 (Oryza rufipogon)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ORUFI03G10000 T125148_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.812 0.952
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.812 0.952
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI03G10000.1 C2H2 ZF 179 200
ORUFI03G10000.1 C2H2 ZF 200 225

Links

Other C2H2 ZF family TFs
Other Oryza rufipogon TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra018490 Brassica rapa Bra018490 I 0.000
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.000
Ca_03592 Cicer arietinum Ca_03592 N 0.000
Ca_06495 Cicer arietinum Ca_06495 I 0.000
Ca_08369 Cicer arietinum Ca_08369 N 0.000
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.000
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.000
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I 0.000
GLYMA10G28320 Glycine max GLYMA10G28320 N 0.000
LjSGA_024860.1 Lotus japonicus LjSGA_024860.1 I 0.000
LjSGA_102554.1 Lotus japonicus LjSGA_102554.1 I 0.000
LjSGA_147985.1 Lotus japonicus LjSGA_147985.1 I 0.000
LjT04G17.30.nc Lotus japonicus LjT04G17.30.nc N 0.000
MTR_1g077300 Medicago truncatula MTR_1g077300 N 0.000
MTR_1g077320 Medicago truncatula MTR_1g077320 N 0.000
MTR_1g077390 Medicago truncatula MTR_1g077390 N 0.000
MTR_1g084950 Medicago truncatula MTR_1g084950 N 0.000
MTR_1g090783 Medicago truncatula MTR_1g090783 N 0.000
MTR_4g028720 Medicago truncatula MTR_4g028720 N 0.000
MTR_7g011950 Medicago truncatula MTR_7g011950 N 0.000